Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7904g00012 ATGGAAGACTTGTACCATGTTTGTTTTAGTACAGTGGATGAAAATTCTAGTTCATCCAATGATATTTTCTGGGGCAGTGAGGAACATAATGAAATAAAGAAGTTACACTTTTCTGGAGCAGAAGATCATGGAGTTTATGGGGGAGTAGACTCCTTTTACTCTAATTTCGAGTTTTCCACAGATTATCCATCAGGATACCTTATATCCCCTAATCAAGAAAAGTATCACCAGCAACAATCATACCATGATCATGGCGATTTGGATGATAACCTTCAGTTTGACATGGTGTCTCCACCACTCCAATTTGATGCACAATATCCAACCAGTGGTACAACAGAGGATAAGCCACACTCAACTTTCCCTTTAGCCTCACTTGAGATCTTGAAGAACTATGGCAAGGGCTTCAAGAGGTTTTCCTATGAAGGCAAATCCCTGCAGCCAGTGGTTGATTCTGTGGCCACAGATGAATTTGGTTTTAGAAAGCTCTCAACTGAAGATATCATGAGGATAGCAGGAACAAGGTTCATCAAATCATCATCTTCAGAGTCAGAACCTTTGACTTTCTTGGAAACTCACCCTTATGGGTTTTCCTTCTCTGGATTCTCTGATGAGGAGAAAGACGATGTGGCACTGTCTGAGTCCCTCTTGGCTTGTGCTGAGAAAGTTGGTCATCAACAATTTGAACGTGCAAGGAAGTTGCTAAGTCACTGCCAATCATTGTCAAGCAAAACTGGGAGCCCCGTTAAGAGAATTGTTCATTATTTTGCTGAAGCACTTCTCCACAGGATAGATAGAGAAACAGGAAGAGCTTCATCCAAGGATTTGCATAAAGGTCAGTCATTTGATCCTGAAGAGGCAGCCAAGGAACTAAACCCCGCTATTGCTGCATTTTATGAAGCGCTTCCCTTTTGTCAGATTTCAGTGTTCACTGCAGTTCAAGCTATAATAGAAGATATAGCTGAAGCAAAGAAGATTCATGTTATTGATCTCGAAATCAGAAAGGGGGGCCAATGGGCTATCCTAATGCAAGCCCTTGAGTCAAGGCATCAATGTCCAGTTGAGCTTCTAAAGATTACCGCTATTGAAAGTGGAACCACTAGACACATTGTTGAGGACACTGGTAAGAGATTGAAGGATTTTGCTCAAGGTTTGAACATACCCTTCTCTTTCAACATCGTTATGGTACCAGACCTGTTACATTTTAAAGAAGATCTTTTTGAGATCGATCCTGAGGAAGCAATTGCTGTTTATTCTCAGTTTGCACTCAGAGCCAAGATTCAACAATCAGACCAGCTTGAAATAATCATGAGAGTGATTAGAACCTTGAATCCTAATGTGATGGTGGTATCTGAAATTGAGGCAAATCACAACTCCACATCTTTTGTAAATCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGACTGTCTTGAGGCTTGCATGAAGGGGAATGAGAAGACCCGAATGATTATAGAGTCACTATACTTTAGTCATGGAATCAAAAACATCGTGGCCACAGAAGGAGCAGAAAGAAAGACTAGGAATGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAACTGAGCACTTTGTCTTTATACCAAGCAGATTTGGTGAGTAAAAGATTTCCTTGTGGAAGTTCTTGCACGTTTGATAAGAATGGGCAGTGCCTTATTGTTGGGTGGAAAGGAACACCGATTAGTTCTGTTTCTGTCTGGAAATTCATTTGA 1758 0.4113 MEDLYHVCFSTVDENSSSSNDIFWGSEEHNEIKKLHFSGAEDHGVYGGVDSFYSNFEFSTDYPSGYLISPNQEKYHQQQSYHDHGDLDDNLQFDMVSPPLQFDAQYPTSGTTEDKPHSTFPLASLEILKNYGKGFKRFSYEGKSLQPVVDSVATDEFGFRKLSTEDIMRIAGTRFIKSSSSESEPLTFLETHPYGFSFSGFSDEEKDDVALSESLLACAEKVGHQQFERARKLLSHCQSLSSKTGSPVKRIVHYFAEALLHRIDRETGRASSKDLHKGQSFDPEEAAKELNPAIAAFYEALPFCQISVFTAVQAIIEDIAEAKKIHVIDLEIRKGGQWAILMQALESRHQCPVELLKITAIESGTTRHIVEDTGKRLKDFAQGLNIPFSFNIVMVPDLLHFKEDLFEIDPEEAIAVYSQFALRAKIQQSDQLEIIMRVIRTLNPNVMVVSEIEANHNSTSFVNRFIEALFFFSAFFDCLEACMKGNEKTRMIIESLYFSHGIKNIVATEGAERKTRNVKIDVWRAFFSRFGMVEKELSTLSLYQADLVSKRFPCGSSCTFDKNGQCLIVGWKGTPISSVSVWKFI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7904g00012 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 573 IPR005202 -
Vium7904g00012 585 Pfam GRAS domain family 212 583 IPR005202 -
Vium7904g00012 585 ProSiteProfiles GRAS family profile. 202 583 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7904g00012 Vium-Chr7904 95795 97900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7904g00012 203 584 GRAS Transcription Factor Family AT3G03450 30.649 1.36e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vium7904g00012 GRAS 3.5e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7904g00012 - - gmx:100818523 865.914