Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7904g00011 ATGGAGAGCCAACAGGAAGTGATAGTAGGAAAGGTATGTGAAATCTATGAGGAAATCTCCAAACTTGGAGACCTCAACCCCTCCAGCCATGTCAACAACCTCTTCACCCAACTTGTCACGATTTGCACCACCCCATGTCAAATAGATGTTTCTCAGCTGAGCCAACAGGTTAGAGAAACCGTAGCAAAGCTCATTAGACTTTGTGGGAAAGCTGAGGGACTTCTTGAGAGTCACTACTCAACCATCATAGGATCATATGAAAATCCTTTAAACCACATGAAACTCTTCCCCTACTACTCTAATTACCTCAAACTAAGTCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAACAAGTCCCCTCCCAACTTGCCTTTGTGGGCTCAGGTCCCCTTCCTCTCACCTCAATCATTTTGGCCACCCATTATCTCAGGCAGACATGCTTCCACAACTACGACATAGATCCTTTGGCAAATGCCAAGGCTTATGGCTTGGTCTCTGCGGATCCTGACTTGTCCAAGAGAATGTTCTTCCACACTAATGATATTCTAAACGTGTCAAATGGCCTCAAGGACTATAACGTGGTCTACTTGGCAGCACTTGTGGGCATGGACCATAAGGATAAAGCAGAAGTCATCAAACACCTTGCCAAGTTCATGGCTCCAGGAGCTATTTTGCTGTTGAGGAGTGCACATGGTGCTAGAGCCTTCCTCTACCCGGTGGTTGATCTTTCTTCCGATCTCAAAGGTTTTGAAGTTCTCTCGGTTTTTCACCCCACTGATGAGGTTATTAACTCAGTTATTGTTGCACGCAAGCATTTGGTGAATCAAGGGACTTATTCAGCAGTGTTGGCTAGCAAATGCTATGGAGTTGAAGGGTTTAATCCCTTCAACCATGGGAAGGTTATTGAGGAGTTGACAGTTGAGGATCAAGCTTGA 942 0.4565 MESQQEVIVGKVCEIYEEISKLGDLNPSSHVNNLFTQLVTICTTPCQIDVSQLSQQVRETVAKLIRLCGKAEGLLESHYSTIIGSYENPLNHMKLFPYYSNYLKLSHLEFTMLTTHCTQQVPSQLAFVGSGPLPLTSIILATHYLRQTCFHNYDIDPLANAKAYGLVSADPDLSKRMFFHTNDILNVSNGLKDYNVVYLAALVGMDHKDKAEVIKHLAKFMAPGAILLLRSAHGARAFLYPVVDLSSDLKGFEVLSVFHPTDEVINSVIVARKHLVNQGTYSAVLASKCYGVEGFNPFNHGKVIEELTVEDQA 313
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium7904g00011 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Vium7904g00011 313 Pfam Nicotianamine synthase protein 2 276 IPR004298 GO:0030410|GO:0030418
Vium7904g00011 313 PANTHER NICOTIANAMINE SYNTHASE 3 3 289 IPR004298 GO:0030410|GO:0030418
Vium7904g00011 313 Gene3D Vaccinia Virus protein VP39 6 274 IPR029063 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium7904g00011 Vium-Chr7904 88299 89542 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7904g00011 1 312 Nicotianamine Synthase Gene Family AT1G09240 52.516 2.68e-115 334