Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7904g00005 ATGATTTCCATTCCCACTTCCTCACTTGCTTCATTTAGCCAAAGAGAAGAAATGGTTGACCGTACAAGGAGCAAGATTCTTATAAGAGAATATAACGAAGATAAAGATGTTAAAATGGTGAGAAAACTAGAGAGGAACTCTGAGATTGGAGCTAAAAAGGTGGTCTCCATTTTTACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTTTTCCCTCTTCGTGTAATGCTGGTAGCTGAGCTTCTCGAGAGCAGGGAACTTGTTGGAGTGGTTAGAGGAGTCATTAAGAATGTAGGAACTCTTTCTGGATCACTCTTGAAGATGGGTTACATCCTAGGCCTCAGAGTCTCTCCTTCTTACAGGAGAAAAGGGGTTGCACTAAGACTTATCGCTGCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGAGTATGCATTCCTAGCCACTGAAAAGGATAATGATGCTTCTAAAAACCTATTCACTGTCAAATGCAATTATGTGAACCTTAGCTCACTTGTCGTATTCGTCCAACCAATTAGTTCCATGACAAAGCATATTTCCAGGGATATAAAAATAGAGAAAGTGGACATAGATCTAGCAATTTCGTTATACAGAAGAACCTTGAAAACCAAAGATTTGTATCCACTAGATATGGACGTTATTCTGAAGGAGAAACTCAGCATAGGCACGTGGGTAAGTTATTATAAGAGAGAGGGCTGGCTCAATTTGCGAAGCAAGGTAGATAATGAAGAAGATCTCATTAGCAGTGAAACTTCAAACTCATGGGTGATTTTTAGTATTTGGAACACTTGTGAAGCTTACAAGTTTCAAGTTAGAAGGTCTCAACTAGTAAGGTTTCTTCTTACAACCTTAAATCAGGCAAGAGAGAGAGTTTTCCCTTGTCTCAAGATGTCGGTGAGTAACTCACTTTGTAGATCCTTTGGTTTTCTCTTTCTTTATGGAATCTATGGGCAGGGAGAAAACCTTGGAGAGCTCATGGAATCCATGTGGAGATTCACATCAAGAGTGGGAGAAGGAATGAAGGACTGTAAGGTGTTTATAACTGAGTTAGGGTTTGGTGATCCACTTGCCAACAATGTTCCTCAAACAGATTCCATCTCGTGTATCGATGATCTTTGGTACACAAAGAGACTTTCAACCCACATTGATGAAAACACTGATGAAATATTGACGAGACAAGTGGGAAATGTGTTTGTCGACCCTAGAGATTTTTAG 1239 0.3995 MISIPTSSLASFSQREEMVDRTRSKILIREYNEDKDVKMVRKLERNSEIGAKKVVSIFTNMMGDPLSRIRFFPLRVMLVAELLESRELVGVVRGVIKNVGTLSGSLLKMGYILGLRVSPSYRRKGVALRLIAAVEEWMVRNGAEYAFLATEKDNDASKNLFTVKCNYVNLSSLVVFVQPISSMTKHISRDIKIEKVDIDLAISLYRRTLKTKDLYPLDMDVILKEKLSIGTWVSYYKREGWLNLRSKVDNEEDLISSETSNSWVIFSIWNTCEAYKFQVRRSQLVRFLLTTLNQARERVFPCLKMSVSNSLCRSFGFLFLYGIYGQGENLGELMESMWRFTSRVGEGMKDCKVFITELGFGDPLANNVPQTDSISCIDDLWYTKRLSTHIDENTDEILTRQVGNVFVDPRDF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7904g00005 412 Gene3D - 28 180 - -
Vium7904g00005 412 CDD NAT_SF 77 148 - -
Vium7904g00005 412 Pfam Acetyltransferase (GNAT) family 80 166 IPR000182 GO:0016747
Vium7904g00005 412 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 161 IPR016181 -
Vium7904g00005 412 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 26 228 IPR000182 GO:0016747
Vium7904g00005 412 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7904g00005 Vium-Chr7904 35500 37888 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium7904g00005 Acetyltransf_1 5.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7904g00005 - - vra:106754018 785.023