Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium78g00004 ATGGAATTGTCACCGTCGTCTTCGTCTTCCTCCTCGTTGTCGTCGTCTTCTGGAAGCGATGCCGGCGGTGGTGGCGCTCTCACGTGGTTCGGGATGAGTTTTCCGTTCCGTTCTCCGCTTTCTCTCGTGATGGATTACTGCACGCGCGAGGATTCCGCGGAGCCCGTGATTATCATTCCCCGGACGCGCCCGCGGTTTCAGGCGCCGGCTGAATCTGCTGCTTCTGTTTCGGCCTCTGACTCTGGCGATAATGTGTGCGGCGGCGCTGAGGAGGTGGCGATACGCATCATTGGGGCCGGCGAGCAAGAGAGCGGTTCGTCGCCGTCGTCATCGAGGAGCCGCGCTGGGGAACCGGGATGTGAGGAGGCGGCGGTGGTTGGGAGGAGCGGGATGCTGTCGTCGGAGGCTCGCCGGCGAATGGCTGAGGAGAGGGTGCCGTTGGTGTCTTTGGATGATGGGATTGGTGGCGGTAGGGATTCTTCTTCGTCTTCCTCTACCTACCAGAGGTATGATATTCAGCAGGTTGCGAAGTGGATTGAACAGATTCTTCCGTTCTCCCTCTTGCTGTTGATTGTTTTCATCCGCCAGCATTTGCAAGGTTTCTTTGTCACAATTTGTATATCTGCTGTGATGTTCAAGTCAAATGAAATTGTTAAAAAGCAGACTGCCTTGAAGGGAGATCGGAAAGTCTCTGTTCTTCTTGGTATCTCTTTTGCCTTTATGCTGCATGTTATATGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGCCATGCTTCCCCCAAAGACAAGTCCACCTTTCTGGCATACAATATTCATCATTTTGGTTAACGGTACGTTTTAG 855 0.5287 MELSPSSSSSSSLSSSSGSDAGGGGALTWFGMSFPFRSPLSLVMDYCTREDSAEPVIIIPRTRPRFQAPAESAASVSASDSGDNVCGGAEEVAIRIIGAGEQESGSSPSSSRSRAGEPGCEEAAVVGRSGMLSSEARRRMAEERVPLVSLDDGIGGGRDSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLGISFAFMLHVICIYWWYRNDDLLYPLAMLPPKTSPPFWHTIFIILVNGTF 284
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium78g00004 284 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 73 283 IPR044235 GO:0061630|GO:1904294
Vium78g00004 284 MobiDBLite consensus disorder prediction 98 122 - -
Vium78g00004 284 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium78g00004 Vium-Chr78 25968 28423 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium78g00004 61 284 C3H Transcription Factor Family AT5G01960 53.125 1.48e-70 222