LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium78g00002	ATGGAATTGTCACCGTCGTCTTCGTCTTCCTCCTCGTTGTCGTCGTCTTCTGGAAGCGATGCCGGCGGTGGTGGCGCTCTCACGTGGTTCGGGATGAGTTTTCCGTTCCGTTCTCCGCTTTCTCTCGTGATGGATTACTGCACGCGCGAGGATTCCGCGGAGCCCGTGATTATCATTCCCCGGACGCGCCCGCGGTTTCAGGCGCCGGCTGAATCTGCTGCTTCTGTTTCGGCCTCTGACTCTGGCGATAATGTGTGCGGCGGCGCTGAGGAGGTGGCGATACGCATCATTGGGGCCGGCGAGCAAGAGAGCGGTTCGTCGCCGTCGTCATCGAGGAGCCGCGCTGGGGAACCGGGATGTGAGGAGGCGGCGGTGGTTGGGAGGAGCGGGATGCTGTCGTCGGAGGCTCGCCGGCGAATGGCTGAGGAGAGGGTGCCGTTGGTGTCTTTGGATGATGGGATTGGTGGCGGTAGGGATTCTTCTTCGTCTTCCTCTACCTACCAGAGGTATGATATTCAGCAGGTTGCGAAGTGGATTGAACAGATTCTTCCGTTCTCCCTCTTGCTGTTGATTGTTTTCATCCGCCAGCATTTGCAAGGTTTCTTTGTCACAATTTGTATATCTGCTGTGATGTTCAAGTCAAATGAAATTGTTAAAAAGCAGACTGCCTTGAAGGGAGATCGGAAAGTCTCTGTTCTTCTTGGTATCTCTTTTGCCTTTATGCTGCATGTTATATGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGCCATGCTTCCCCCAAAGACAAGTCCACCTTTCTGGCATACAATATTCATCATTTTGGTTAACGGTACGTTTTAG	855	0.5287	MELSPSSSSSSSLSSSSGSDAGGGGALTWFGMSFPFRSPLSLVMDYCTREDSAEPVIIIPRTRPRFQAPAESAASVSASDSGDNVCGGAEEVAIRIIGAGEQESGSSPSSSRSRAGEPGCEEAAVVGRSGMLSSEARRRMAEERVPLVSLDDGIGGGRDSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLGISFAFMLHVICIYWWYRNDDLLYPLAMLPPKTSPPFWHTIFIILVNGTF	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium78g00002	284	PANTHER	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	73	283	IPR044235	GO:0061630\|GO:1904294
	Vium78g00002	284	MobiDBLite	consensus disorder prediction	98	122	-	-
	Vium78g00002	284	MobiDBLite	consensus disorder prediction	1	21	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium78g00002	Vium-Chr78	21578	24036	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium78g00002	61	284	C3H Transcription Factor Family	AT5G01960	53.125	1.48e-70	222

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium78g00002	-		K22379	gmx:100784614	405.986