Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7826g00010 ATGGAATCTTTCAAACAGAATGGTGGAAGTTCTGTGAACAATACCAAAGGCTTCACTCTGCAAGTCCTTACAGGGCGTTGGTTCATGGCTTTTTCCTCATTCATGATCATGTCTGTATCAGGAGCAAGCTACATGTTCAGTCTATATTCAAGGGAAATCAAATCAGTTTTAGGGTATGATCAATCCACCCTGAATCTGTTAAGCTTCTTCAAGGATTTGGGGTCCAACATAGGCATCATTTCAGGCCTAATCAATGAGGTCACACCCCCTTGGGTGGTGTTAACAATTGGTGGAGTTCTCAACTTTTTTGGCTATTTCATAATTTGGCTTGCAGTGACCAGAAAAATTGCCAGGCCCCAGGTGTGGAAAATGTGCTTATACATCTTCATTGGAGCAAATTCTCACTGTTCCACTAACACTGGAGTCATTGTGACCAGTGTGAAGAACTTCCCAGGCACAAGGGGCATTGTCATTGGCCTTCTTAGTGGCTACCTTGGTTTGAGTGCAGCAATCATCACTCAGATATACTATGCCTTCTATGGAAATGACTCCAAGTCTCTGATTTTGCTTATGGCATGGCTACCAACTGCTGTAACTTTTGTTTTCTTGCCAGTTATCAGACACCACAAGGGAGTCCAACAGCCAAATGATTCCAAGGCTTTCTACAATTTCCTCTACACCACTTTAGTTCTTGCAGGTTTCCTCATGGTAGTCATCATACTGCAAAAAAGTTTCAACTTTACTAAGAGTGAGTACTATGTCACTACTATACTGATGCTTCTGTTGCTCATCCTTCCACTTGTTGTTGTTATGTTTGAAGAACAAAAGATTTGTAAGAGGAAACAAGAGCACAGCAACAGTGAAAACCCTCCTAAGCCTTTGAATATACCAACAGAGATGCCAAATCCAGAGAATTCTGCAGAGAAGCAAGTTTCCTGTTGGAAAAGCATGTTCAGCCCACCAAGTAGAGGTGAAGATTATACAATACTTCAAGCCATTTTTAGCCTTGACATGGTGATTCTTTTCTTAGCAACAATCTGTGGACTTGGTGGCACACTCACTGTGGTAAACAACTTGAGCCAAATCGGTGCATCCTTAGGATATTCATCACACAGTGTTACAACATTTGTGTCCCTTATGGCTATTTGGATCTATATGGGTAAAATAGTGCAGGGTGTGATATCAGAAATTATCATAGCCAAATTTAAAGTTCCTAGGCCTATTTTGTTCACTTCAATTCTTGTCATGCCTTGTATTGGTCACCTTCTGATTGCTTTCAATGTCCCTAATGGTCTGTATGCAGCCTCAATGATAATTGGATTCTGCTTTGGGGCAAATTGGCCACTGCTGTTTTCCATCATATCAGAACTTTTTGGTCTGAAATTTTACTCAACTCTGTATAATGTTGGGTCAGTGGCAAGTCCAATTGGGTCATACTTGTTCAGTGTAAGGGTTGCAGGGTATTTGTATGACAAGGAAGCCAGAAGGCAAATGGCAGCATTAGGAGTGAAGAGGAAACCTGGGGAGGAGTTGAATTGCTATGGAAGTGAGTGTTACAAAAAGGCTTTCATTATAATCACTGCAGTGAGCCTGTTTGGGGCACTTGTGTCTCTCATCTTGGTGTCAAGGACTAGAGAGTTTTATAAAGGTGACATATACAAGAAGTTCAAAGAAGAAGATGGAACTGCTGAAGCTGAAATTGGTCTGACTCAGAACAAGTTTGCACAACAACCTCCTGCAAATGAAGGCTAG 1752 0.4138 MESFKQNGGSSVNNTKGFTLQVLTGRWFMAFSSFMIMSVSGASYMFSLYSREIKSVLGYDQSTLNLLSFFKDLGSNIGIISGLINEVTPPWVVLTIGGVLNFFGYFIIWLAVTRKIARPQVWKMCLYIFIGANSHCSTNTGVIVTSVKNFPGTRGIVIGLLSGYLGLSAAIITQIYYAFYGNDSKSLILLMAWLPTAVTFVFLPVIRHHKGVQQPNDSKAFYNFLYTTLVLAGFLMVVIILQKSFNFTKSEYYVTTILMLLLLILPLVVVMFEEQKICKRKQEHSNSENPPKPLNIPTEMPNPENSAEKQVSCWKSMFSPPSRGEDYTILQAIFSLDMVILFLATICGLGGTLTVVNNLSQIGASLGYSSHSVTTFVSLMAIWIYMGKIVQGVISEIIIAKFKVPRPILFTSILVMPCIGHLLIAFNVPNGLYAASMIIGFCFGANWPLLFSIISELFGLKFYSTLYNVGSVASPIGSYLFSVRVAGYLYDKEARRQMAALGVKRKPGEELNCYGSECYKKAFIIITAVSLFGALVSLILVSRTREFYKGDIYKKFKEEDGTAEAEIGLTQNKFAQQPPANEG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7826g00010 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 551 - -
Vium7826g00010 583 CDD MFS_Mch1p_like 25 534 - -
Vium7826g00010 583 SUPERFAMILY MFS general substrate transporter 231 546 IPR036259 -
Vium7826g00010 583 Gene3D MFS general substrate transporter like domains 331 549 IPR036259 -
Vium7826g00010 583 SUPERFAMILY MFS general substrate transporter 22 213 IPR036259 -
Vium7826g00010 583 MobiDBLite consensus disorder prediction 288 306 - -
Vium7826g00010 583 Pfam Nodulin-like 26 270 IPR010658 -
Vium7826g00010 583 MobiDBLite consensus disorder prediction 281 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7826g00010 Vium-Chr7826 109494 111611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7826g00010 16 559 Nodulin-like Gene Family AT2G39210 61.360 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7826g00010 - - gmx:100789645 978.008