Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7821g00001 ATGCACATTTTGTTACCAGACATGGGAAGAGAAATTATTCCTCAACTATGCCCAGAGAAACAGGGGAAGAAAAGTCGATTGTGGTTGCAGGATGACGTAAAAGATGTACTGAAAGAGAATACTGGGACAGAAGCTATCCAGGGATTGTCCCTGAAACTGCATTCAACAAGCAGAGATTGCTTCAAAACTCATGCTTTCAAGGAAATGAAGAATTTAAGACTTCTACGACTAGATCATGTGCAAGTTGTTGGAGATTATGGGCACATTTCTAAAGAATGGAGATGGATTTGCTGGAAAGGATTCGCTTCTAAATACATTCCAAACAACTTTTATATGGGAAATGTAATTGCAATTGATTTAAGACATAGTCATCTTCAACTCGTCTGGAAACAACCACTCTGGAAAAAACCCCAGGTTTTGGAGCGGTTAAAATTCCTTAATCTTAGTCACTCCAAATACTTGAAAGAAACACCAGACTTTTCCAGACTACCAAGTCTTGAACAGCTCATTCTAAAAGATTGTCCAAGTTTGCGCAAGGTACACCAATCCATTGGTGATCTCTCCAATATACTAGTAATAAATTTGAAGGATTGCACAAGTCTAAGCTATCTCTCCCAAGAGATATATAAGTTGAGATCTCTAAAAACTCTCATCCTATCTGGTTGTTCGAAGCTTGGCTCTATAGATATAGCACAGGTGAAATCCTTGGCAACTATAATTACTTAA 726 0.3802 MHILLPDMGREIIPQLCPEKQGKKSRLWLQDDVKDVLKENTGTEAIQGLSLKLHSTSRDCFKTHAFKEMKNLRLLRLDHVQVVGDYGHISKEWRWICWKGFASKYIPNNFYMGNVIAIDLRHSHLQLVWKQPLWKKPQVLERLKFLNLSHSKYLKETPDFSRLPSLEQLILKDCPSLRKVHQSIGDLSNILVINLKDCTSLSYLSQEIYKLRSLKTLILSGCSKLGSIDIAQVKSLATIIT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7821g00001 241 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 227 IPR044974 GO:0006952
Vium7821g00001 241 SUPERFAMILY L domain-like 53 235 - -
Vium7821g00001 241 Gene3D Ribonuclease Inhibitor 33 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7821g00001 Vium-Chr7821 3416 4716 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7821g00001 9 228 WRKY Transcription Factor Family AT4G12020 32.468 2.25e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7821g00001 - - vum:124845898 491.5