Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7818g00023 ATGGTTGACACTTTCAGTGTAGAGAGTAGGCTTCATATAAGAGAGTTTGATGAAGGTAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTATATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGAGAACTCCTTCTGAATCATTGCTGAAGATTGGTTGCATACTAGGCCTTAGAGTCTCTCCTTCACACAGGAGAAAGGGGATTGGACTGAAACTTGTCACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCCTGGCAACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAGCAGATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCGTTATACAGAAGAACCCTGATGGCCAAAGAGCTTTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTGCAGAGAAAGGAAGAGAGTGAAGACATTATTACCAATGAAATCACAAGCTCGTGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTACAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAGCTTTAAATCATGCAAGAGACAAAATCTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGGCCCTTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCACAGTGGTTATAACGGAGCTAGGGTTTGGTGATCCACTTGTAAACCATATCCCTCAAACAGCTTCCATGTCGTGCATCGATGATATTTGGTACACGAAAAGAATTTCAAGCCACAGTGACGAAAAGGATGATGAACTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1194 0.4305 MVDTFSVESRLHIREFDEGRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRLYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCKYVSLSSLFIFVHPISFPAKQISKDIEIEKVNIDQAISLYRRTLMAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTALNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDCTVVITELGFGDPLVNHIPQTASMSCIDDIWYTKRISSHSDEKDDELLIKRQIGNVFVDPRDF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7818g00023 397 CDD NAT_SF 62 133 - -
Vium7818g00023 397 Gene3D - 21 162 - -
Vium7818g00023 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 233 IPR000182 GO:0016747
Vium7818g00023 397 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
Vium7818g00023 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Vium7818g00023 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7818g00023 Vium-Chr7818 134156 135900 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium7818g00023 Acetyltransf_1 2.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7818g00023 - - vum:124845889 701.819