Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7818g00022 ATGGTTGACACTTTCAGTGTAGAGAGTAGGCTTCATATAAGAGAGTTTGATGAAGGTAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTATATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGAGAACTCCTTCTGAATCATTGCTGAAGATTGGTTGCATACTAGGCCTTAGAGTCTCTCCTTCACACAGGAGAAAGGGGATTGGACTGAAACTTGTCACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCCTGGCAACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAGCAGATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCGTTATACAGAAGAACCCTGATGGCCAAAGAGCTTTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTGCAAAGAAAGGAAGAGAGTGAAGACATTATTACCAATGAAATAACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTACAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAGCTTTAAATCATGCAAGAGACAAAATCTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGGCCCTTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCACAGTGGTTATAACGGAGCTAGGGTTTGGTGATCCACTTGTAAACCATATCCCTCAAACAGCTTCCATGTCGTGA 1080 0.4324 MVDTFSVESRLHIREFDEGRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRLYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCKYVSLSSLFIFVHPISFPAKQISKDIEIEKVNIDQAISLYRRTLMAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTALNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDCTVVITELGFGDPLVNHIPQTASMS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7818g00022 359 CDD NAT_SF 62 133 - -
Vium7818g00022 359 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 233 IPR000182 GO:0016747
Vium7818g00022 359 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
Vium7818g00022 359 Gene3D - 20 162 - -
Vium7818g00022 359 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 359 - -
Vium7818g00022 359 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7818g00022 Vium-Chr7818 127366 129110 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium7818g00022 Acetyltransf_1 2.1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7818g00022 - - vum:124845889 701.819