Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7800g00005 ATGAGGTCAACAATGCTTAAATGCATAATAAGTATAGTGTCGGTCATATATTTGTTGAATCAAAATGCTCATTGTGAACTGCAGGTTGGGTTTTACAGCTACTCATGTGGTATGGCTGAGTTCATTGTCAAGGATGAAGTCAGAAAAGCTGTCAGTAATAATCCTGGGATTGCTGCTGGGCTTGTCAGAATGCATTTTCATGATTGCTTTATCAGAGGGTGTGATGCATCAGTGCTTCTTGATTCCACTCCCTCAAACACTGCAGAGTAAGACTCTCCCGCAAATAAACCAAGTCTTCGAGGGTACGAAGTCATTGATCAAGCCAAGGCTAAACTTGAAGCAGTGTGTCCAGGGATTGTTTCTTGTGCTGACATTCTGGCATTTGCAGCAAGGGACAGTGTGGAGTTAGCTGAAGGGCTTGGTTATGATGTTCCAGCAGGTAGAAGAGATGGCCGAATCTCACTAGCTTCAGACACTAGAACAGAGTTACCTCCTCCAACCTTTAATGTAAACCAGCTCACTCAACTCTTCGCAAGGAAGGGATTAACACAGGATGAAATGGTCACCCTCTCAGGAGCACACACCATTGGCCGCTCTCATTGCTCAAGTTTCAGCAAGAGATTGTACAATTTCAGTGCCAGTTCTAGACAGGATTCAAGTTTAGATCCCTCATACGCAGTATGGCTGAAGCGGAAATGTCCACAAGGCAGCACAAACCCAAACATGGTGGTTCCAATGAACCCTTCAAGTCCTGGAATTGCAGATGTAGGCTACTATGTTGACATATTAGCAAACCGAGGCCTGTTCACATCCGACCAGACTCTCTTAACTAATGCTGAAACAGCCAGCCAGGTGGAGCAAAATGCCAGGGATAGCTATCAATGGGCAAGCAAATTTGCTGATGCCATGGTTAAGATGGGTCAAATCAGTGTCTTAACAGGTAATGCTGGAGAGATTAGAACAAATTGCAGGGTGGTCAGTAGCTAG 987 0.4478 MRSTMLKCIISIVSVIYLLNQNAHCELQVGFYSYSCGMAEFIVKDEVRKAVSNNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPSNTAEXDSPANKPSLRGYEVIDQAKAKLEAVCPGIVSCADILAFAARDSVELAEGLGYDVPAGRRDGRISLASDTRTELPPPTFNVNQLTQLFARKGLTQDEMVTLSGAHTIGRSHCSSFSKRLYNFSASSRQDSSLDPSYAVWLKRKCPQGSTNPNMVVPMNPSSPGIADVGYYVDILANRGLFTSDQTLLTNAETASQVEQNARDSYQWASKFADAMVKMGQISVLTGNAGEIRTNCRVVSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7800g00005 328 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Vium7800g00005 328 Gene3D Peroxidase, domain 2 164 306 - -
Vium7800g00005 328 PANTHER PEROXIDASE 25-RELATED 15 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 FunFam Peroxidase 164 306 - -
Vium7800g00005 328 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vium7800g00005 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vium7800g00005 328 Gene3D - 30 326 - -
Vium7800g00005 328 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 Pfam Peroxidase 43 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7800g00005 328 FunFam Peroxidase 30 176 - -
Vium7800g00005 328 ProSiteProfiles Plant heme peroxidase family profile. 26 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7800g00005 Vium-Chr7800 80408 81977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7800g00005 6 328 Peroxidase AT1G05260 49.544 1.44e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7800g00005 K00430 - gmx:100779031 572.392