Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7767g00002 ATGGCTGGCAGTAACCAAGTCAATCTCAATGAATCTAGGAGTGTTGTTCCGCTGAATACGTGGGTGTTAATCTCGAATTTCAAGCTGTCTTATAAGCTTCTCAGACGTGACGACGGAACTTTCAATCGTGAGTTGGCGGAGTTTCTTGATAGGAAGGTCCCTGCCAATGCAATTCCCGTTCATGGGGTGTTTTCCATCGATCATGTTGATAGAAACGTTGGCTCGTTTTATCGGGTGTATTTGCCGGCCCCTGGGAACGAGGCTCAATGGGGTATCAGAGACCTCGAGAGGCCGTTGAGCACCACGGAAATTGTTCCTGTAATCATATTCTTTCATGGGGGAAGCTTCTCGCATTCCTCGGCAAACAGTGCTATCTACGATACCTTCTGCAGGTACCTTGTGAGCATTTGCAAGGCTGCTGTGGTGTCCGTGAACTACCGGAGATCGCCGGAGCATCGGTATCCGTGCGCCTACGATGATGGATGGGCAGCATTGGAGTGGGTGAAGTCCAGAACGTGGCTGCAAAGTGGGAGGGAGTCCAAGGTTCATGTCTACTTGGCAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCAGTAAAGGCTGCGGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTCGGAGGAGAGAAGAGGACGGAATCAGAGTTGAGGTTGGATGGGAAATACTTCGTGAGGTTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTGCCTGAAGGAGAGAATAGAGACCACCCTGCTTGCAACCCCTTTGGACCAAGGGGGAAAAGCCTTGCGGGACTCAGGTTCCCCAAAAGTCTTGTTTGCGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAACTGGCATATACAAAAGGTCTCGAGGATTCTGGACAAGAGGTCAAACTTCTCTATCTCAAGGATGCCACTATTGGCTTCTACTTCTTGCCAAACAATGAACATTTCTACTGCCTCATGAGGGAAATCAACAACTTCGTGAATTCTGACTGTTAA 1035 0.4908 MAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVHGVFSIDHVDRNVGSFYRVYLPAPGNEAQWGIRDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRYLVSICKAAVVSVNYRRSPEHRYPCAYDDGWAALEWVKSRTWLQSGRESKVHVYLAGDSSGGNIVHHVAVKAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGKSLAGLRFPKSLVCVAGLDLLQDWQLAYTKGLEDSGQEVKLLYLKDATIGFYFLPNNEHFYCLMREINNFVNSDC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7767g00002 344 SUPERFAMILY alpha/beta-Hydrolases 75 341 IPR029058 -
Vium7767g00002 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Vium7767g00002 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Vium7767g00002 344 PANTHER ARYLACETAMIDE DEACETYLASE 38 315 - -
Vium7767g00002 344 FunFam Gibberellin receptor GID1 1 342 - -
Vium7767g00002 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vium7767g00002 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7767g00002 Vium-Chr7767 19726 22240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7767g00002 1 342 Carbohydrate Esterase AT3G63010 73.178 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7767g00002 K14493 - gmx:100788435 649.047