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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium7755g00001
ATGGGACGTGTGATCCGTGCGCAGCGTAAGGGTGCGGGCTCAGTCTTCAAGTCCCACACTCACCACCGCAAGGGACCGGCTCGCTTCCGGAGCCTGGACTTCGGGGAGCGGAATGGCTACCTCAAGGGTGTCGTTACCGACGTCATCCACGACCCTGGCCGCGGTGCCCCACTTGCCAAGGTGACTTTCCGCCACCCATTCAGATACAAGAAGCAAAACGAGCTCTTCGTTGCCGCCGAAGGCCTTTATACGGGTCAGTTCATATACTGTGGCAAGAAGGCCACTCTCGTAGTTGGTAATGTTTTGCCCCTTCGCTCTATCCCTGAAGGAGCTGTTATATGCAACGTTGAGCACCATGTCGGTGACCGTGGTGTCTTTGCTAGGGCTTCCGGCGATTATGCCATCGTTATCAGTCACAACCCTGATAATGACACCTCTAGGTTCGTATCCGC
452
0.5597
MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTFRHPFRYKKQNELFVAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRFVSA
151
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium7755g00001
151
PANTHER
RIBOSOMAL PROTEIN L2
2
147
IPR002171
GO:0003735|GO:0005840|GO:0006412
Vium7755g00001
151
Pfam
Ribosomal Proteins L2, C-terminal domain
98
141
IPR022669
GO:0003735|GO:0005840|GO:0006412
Vium7755g00001
151
SMART
Ribosomal_L2_2
11
90
IPR002171
GO:0003735|GO:0005840|GO:0006412
Vium7755g00001
151
SUPERFAMILY
Nucleic acid-binding proteins
1
97
IPR012340
-
Vium7755g00001
151
FunFam
60S ribosomal protein L2
1
86
-
-
Vium7755g00001
151
SUPERFAMILY
Translation proteins SH3-like domain
99
142
IPR008991
-
Vium7755g00001
151
SMART
Ribosomal_L2_C_2
96
151
IPR022669
GO:0003735|GO:0005840|GO:0006412
Vium7755g00001
151
Gene3D
-
1
86
IPR012340
-
Vium7755g00001
151
Pfam
Ribosomal Proteins L2, RNA binding domain
13
90
IPR022666
GO:0003735|GO:0005840|GO:0006412
Vium7755g00001
151
Gene3D
-
90
149
IPR014722
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium7755g00001
Vium-Chr7755
2621
3134
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium7755g00001
1
148
Cytoplasmic Ribosomal Protein Gene Family
AT4G36130
92.568
4.79e-102
291
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium7755g00001
K02938
-
gmx:547677
302.753
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