Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7739g00004 ATTAAAACTGGTTGCTGTTTTAGATTAGCTTGTGATGATGGTAGAGTCTGCTACCCTTTACAGGAAGCATTAGGCTATTTTTTCTGTCTAGAGGATCGGGCACTGTTCTGCAGAAAATGTGATTTGGCAATACATACAGCAAATGCTTATGTCTCTGGTCATCAGAGGTTTCTTCTCACCGGTGTAAGAGTAGGCCTTGAAGCTACAGAGCCTGGTGCATCCTCATCGTCTTTGAAGACAGATTCTGGGGAGAAAATTTCTGATACAAAGTCGTCTTCTATCTCTAGAAAGGTTTCCACAGAACCTCAGAACTCAGATTACAATGAATTGTTACCTATCGAAGGTGGAGGAGTTGGGGGGTTTCCACCAGCTAAGGAGTCTTTTGGTGGTGGTTCTACCGTTGGAAATATCTCACAGTGGACAATAGATGAATTTATTGGCCTAAACGAGTTCAGTCAGAATTATGATTACATGGAAGGATCAACAAGGGCTGACAGTGGTAAGTTAGGGGATTCTGATTCTCCGGAGGAAATGAAGGAGGAGGAGGAGTATTTGGAACATGTTCCAGATTCTTCATGGACAGTTCCACAGATCCCTTCACCACCAACAGCTTCTGGGTTACACTGGCCAAAACACCTTCAGTATTCATCTGATAGTCTTCTGTTTGTTCCAGACATAAGCTTTTCTCACATGCAACACTCTCATAAGATCAGCAGTACTTTTTCTAGACGCCGGAGGCACCTTGAATAA 750 0.4307 IKTGCCFRLACDDGRVCYPLQEALGYFFCLEDRALFCRKCDLAIHTANAYVSGHQRFLLTGVRVGLEATEPGASSSSLKTDSGEKISDTKSSSISRKVSTEPQNSDYNELLPIEGGGVGGFPPAKESFGGGSTVGNISQWTIDEFIGLNEFSQNYDYMEGSTRADSGKLGDSDSPEEMKEEEEYLEHVPDSSWTVPQIPSPPTASGLHWPKHLQYSSDSLLFVPDISFSHMQHSHKISSTFSRRRRHLE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7739g00004 249 MobiDBLite consensus disorder prediction 161 199 - -
Vium7739g00004 249 PANTHER B-BOX ZINC FINGER PROTEIN 22 16 228 - -
Vium7739g00004 249 MobiDBLite consensus disorder prediction 70 107 - -
Vium7739g00004 249 SMART bboxneu5 12 59 IPR000315 GO:0008270
Vium7739g00004 249 MobiDBLite consensus disorder prediction 169 188 - -
Vium7739g00004 249 CDD Bbox1_BBX-like 10 59 - -
Vium7739g00004 249 ProSiteProfiles Zinc finger B-box type profile. 12 59 IPR000315 GO:0008270
Vium7739g00004 249 MobiDBLite consensus disorder prediction 70 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7739g00004 Vium-Chr7739 18755 20618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7739g00004 17 248 C2C2-CO-like Transcription Factor Family AT1G78600 38.889 4.26e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7739g00004 - - vum:124845755 504.212