Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7739g00003 ATGAAAAGGTTCATGCGGCTAACAAGCTTGCCAGCAAGCACCAGAGAGTTCCTCTTTCTACCTCTTCCTCTCATATGCCCAAATGTGACATTTGCCAGATTAGCTTGTGATGATGGTAGAGTCTGCTACCCTTTACAGGAAGCATTAGGCTATTTTTTCTGTCTAGAGGATCGGGCACTGTTCTGCAGAAAATGTGATTTGGCAATACATACAGCAAATGCTTATGTCTCTGGTCATCAGAGGTTTCTTCTCACCGGTGTAAGAGTAGGCCTTGAAGCTACAGAGCCTGGTGCATCCTCATCGTCTTTGAAGACAGATTCTGGGGAGAAAATTTCTGATACAAAGTCGTCTTCTATCTCTAGAAAGGTTTCCACAGAACCTCAGAACTCAGATTACAATGAATTGTTACCTATCGAAGGTGGAGGAGTTGGGGGGTTTCCACCAGCTAAGGAGTCTTTTGGTGGTGGTTCTACCGTTGGAAATATCTCACAGTGGACAATAGATGAATTTATTGGCCTAAACGAGTTCAGTCAGAATTATGATTACATGGAAGGATCAACAAGGGCTGACAGTGGTAAGTTAGGGGATTCTGATTCTCCGGAGGAAATGAAGGAGGAGGAGGAGTATTTGGAACATGTTCCAGATTCTTCATGGACAGTTCCACAGATCCCTTCACCACCAACAGCTTCTGGGTTACACTGGCCAAAACACCTTCAGTATTCATCTGATAGTCTTCTGTTTGTTCCAGACATAAGCTTTTCTCACATGCAACACTCTCATAAGATCAGCAGTACTTTTTCTAGACGCCGGAGGCACCTTGAATAA 825 0.4388 MKRFMRLTSLPASTREFLFLPLPLICPNVTFARLACDDGRVCYPLQEALGYFFCLEDRALFCRKCDLAIHTANAYVSGHQRFLLTGVRVGLEATEPGASSSSLKTDSGEKISDTKSSSISRKVSTEPQNSDYNELLPIEGGGVGGFPPAKESFGGGSTVGNISQWTIDEFIGLNEFSQNYDYMEGSTRADSGKLGDSDSPEEMKEEEEYLEHVPDSSWTVPQIPSPPTASGLHWPKHLQYSSDSLLFVPDISFSHMQHSHKISSTFSRRRRHLE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7739g00003 274 MobiDBLite consensus disorder prediction 95 132 - -
Vium7739g00003 274 MobiDBLite consensus disorder prediction 194 213 - -
Vium7739g00003 274 CDD Bbox1_BBX-like 35 84 - -
Vium7739g00003 274 MobiDBLite consensus disorder prediction 95 135 - -
Vium7739g00003 274 SMART bboxneu5 37 84 IPR000315 GO:0008270
Vium7739g00003 274 ProSiteProfiles Zinc finger B-box type profile. 37 84 IPR000315 GO:0008270
Vium7739g00003 274 MobiDBLite consensus disorder prediction 186 224 - -
Vium7739g00003 274 PANTHER B-BOX ZINC FINGER PROTEIN 22 41 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7739g00003 Vium-Chr7739 10445 13610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7739g00003 42 273 C2C2-CO-like Transcription Factor Family AT1G78600 38.889 1.50e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7739g00003 - - vum:124845755 487.263