Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7734g00007 ATGCAGATTTCCATCAAGAAAGATCCTTCGGTCAACCCTTCAAGGAACCGGTTGAAAACTCTAAGCTGGCAAGAGCGACGAAAACTTGATAGAGAAAGGAAGCAACAAGACGAGGATGAGCAAACATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAGATGGGTTACACTCCAGGTTCTGCCCTTGGCAAGCAGGGCTCAGGCAGGGCCGAACCAGTGGGGATTGAAATTCGGCGGTCACGAGCTGGTGTAGGATTAGAAGATCCCCACAAAGAGAAGAGGAAAAAGGAGGAAATCATGTTGAACAGGAAAAGGAGGAAAGAAGAGGACCTAATGAAAGAATTTGGGTCCAGGCAGAAGTCACAGTGGCAGAGTAAGAGAATTATAATTAATTATAATAAGGCAAAGGCTGCCCTTGACCAATTGGAAAATAGGGAAATTTTGGAGCCAGAAAAGAATGATGATGATTCAGAGGTTGAAGAAGAAGAGGAAGAAATAACAGAAGAGGAATTAAACGATGTTTTGATGAAACTGAGGGATGAATTTAATTATTGCCTCTTCTGTGGATGCAAATACGAATCAAGTGAAGCCCTTTTGGACAACTGCCCTGGAACCAATGAAGATGACCACTAA 660 0.4288 MQISIKKDPSVNPSRNRLKTLSWQERRKLDRERKQQDEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKKEEIMLNRKRRKEEDLMKEFGSRQKSQWQSKRIIINYNKAKAALDQLENREILEPEKNDDDSEVEEEEEEITEEELNDVLMKLRDEFNYCLFCGCKYESSEALLDNCPGTNEDDH 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7734g00007 219 ProSiteProfiles G-patch domain profile. 52 98 IPR000467 GO:0003676
Vium7734g00007 219 MobiDBLite consensus disorder prediction 154 180 - -
Vium7734g00007 219 Coils Coil 161 190 - -
Vium7734g00007 219 MobiDBLite consensus disorder prediction 162 179 - -
Vium7734g00007 219 Pfam G-patch domain 52 95 IPR000467 GO:0003676
Vium7734g00007 219 MobiDBLite consensus disorder prediction 1 19 - -
Vium7734g00007 219 Coils Coil 103 123 - -
Vium7734g00007 219 MobiDBLite consensus disorder prediction 20 44 - -
Vium7734g00007 219 Pfam Domain of unknown function (DUF4187) 167 219 IPR025239 -
Vium7734g00007 219 SMART DUF4187_2 165 219 IPR025239 -
Vium7734g00007 219 MobiDBLite consensus disorder prediction 1 48 - -
Vium7734g00007 219 Coils Coil 134 154 - -
Vium7734g00007 219 SMART G-patch_5 50 96 IPR000467 GO:0003676
Vium7734g00007 219 PANTHER UNCHARACTERIZED 8 219 IPR039249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7734g00007 Vium-Chr7734 30033 32514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7734g00007 44 94 C2H2 Transcription Factor Family AT5G26610 45.098 5.59e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7734g00007 - - gmx:100806249 367.851