Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7733g00005 ATGGCGGGTGCGATGAATAAGAAGGTCGACAAGATTCGCCAAATCGTGCGTCTCAAACACCTCATGTCGCGGTGGAAGCAAATGAGCATCAGCCGCCGCTCCGAGGACCCTTCCTCCACGCGCCGCCCTCCCTCCGGGTTCACCTTCGTGTACGTCGGCCCCGAACGCACGCGCTTCGCCATACCCGCGCGTTTCCTCAACCTCCCCGTCTTCGAGGGGCTCCTCAAACAAACCGAGGAACAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCTTGCCAAGTCCCCTTTTTCTCTAACGTCGTTAAATTTCTCCACAAGGACGAACACAAGTACGGGAAACTCTCTCTCCAAGACTTCCTCAACTTGGTCTCCGATGCTGACGTTTCCGATTCCTGTAAGGAAAACGTCGTCGTTTTCACCCCTCTGCTGCAGAAAGCAGAGGTTTGA 453 0.5607 MAGAMNKKVDKIRQIVRLKHLMSRWKQMSISRRSEDPSSTRRPPSGFTFVYVGPERTRFAIPARFLNLPVFEGLLKQTEEQFGLRGNGGLVLPCQVPFFSNVVKFLHKDEHKYGKLSLQDFLNLVSDADVSDSCKENVVVFTPLLQKAEV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7733g00005 150 Pfam Auxin responsive protein 19 106 IPR003676 GO:0009733
Vium7733g00005 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7733g00005 Vium-Chr7733 41923 43660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7733g00005 8 120 Calmodulin-binding Proteins AT3G43120 28.859 8.19e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7733g00005 K14488 - gmx:100797463 249.595