Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7724g00009 ATGGAGGAACATAAACCTGTTATCTCCACTTGTGAACAAGATCAACACGTGGTTGCTGCTGCTCAACACATTTTAAAGGCACTAGCAGCCAGTAAGAATGTGTCCAGTGACTTGAGAAAAACCCTCTTGGATGTTGAGTCCCAATTGTCCGCAATTTCCATAGTCAATGAGAGGAAAGGAAGGGGTATCAAGCCATTAGAGAACCGGCTCAAGTGTGTTGAAGACAAGGTAACGAGGTGGGTAGCAAACCCTTCCATGACATGGGACTCTAGTCCCAATCAGTCTTCAAACTATTTGAGAGTTGTTGGTGAAATCCAAACACTGATTCAGAGTTTGGAAAGCTTTTCTGTGGTGAATGATAATGGGAGGCAGAAGGAACTTCTTGAGAGAGCATATGCAGTTTTGCAGGATGCTATGTCAAGGCTTGAGAGAGAATTAGACCACATTCTTGTTGAACATAAGCAGTACTTTGAGCCTGAATACATGTCTTTCGATTCTAAAATGGATATGGCATATGATGAATCATTTCGTGCAGTGGAGAATGAACAAGTTAACGAGGTCATCAGGAGTACCGGTTCTAGCCAATCCGAGGCCAACATTGTTGATCTGATGAATCCAGCAGTACTTGAGTATCTCAAGAGCATTGCAAATGTCATGTTTGACTCAAAATACCATCAGGAGTTCTGTCAGGTCTTCATTTCATCCAGAAGGGATGCCTTGGCTGAGTATTTTGTTATTCTTAAGATGGGAAAATTAAGCATTGAGGATGTGCTGAAACTGGAGTGGCAGTGCTTGAACCATGAGATGAAGAAATGGATACGAGCCATGAAGATCATTGTTCAGGTGTATCTTGTCAGTGAGAAAAGATTGTGCAAACACATCCTTGGGGACTTTGGATCCTTTTATCAGTGTTGCTTTTCTGAAATTTCTCAGAGTTTTATGCTTCTCCTTTTGAATTTTGGAGAGGCCGTGGCAATGGGAACACACAGCCCAGAAAGAATATTTCGTTTGCTTGATATGCATGAGGTTTTGGAGCATCTTTCAGTGGATGTAGATAAATTGTTCTTTGAAGAAGTTGGTGCTTTTGTCAGAGGAGAGTTTCACAAGCTTCTAACGAGCATTGGTGACACTATTAAGTCTACATTTCTGGCATTCAGAAATGCTATTGCAACTAACCATTCAAAGACTCCTTTTCCTCAAGGGGGTGTTCACCATGTTACCAAGTATGTGATGAATTACATCATGACGCTAGGTGAATATGGTGATACCCTTAATCTCCTTCTTGTTGAAGAATATTCAAATGATCCTGCAGTCTATGAACAAGAAACATCAGCTCTCTCACTGTGTCCAGTGGCCTTCTACTTTCGGTCAATCACCACAGCTCTAGAATCCAACTTGAGCAACAAGTCCAAACTATACAAAGATGTGGCTTTGCAACATATTTTCATGATGAACAACATTCGTTACATGGTGCAAAAGGTGAAGTGCTCTGATCTAAGCCACTATTTTGGAGACTGCTGGCTTCGGCAGCACACTGCTGAGTATCAGCGCGATGCAAGGTGTTATGAGAGGGTCACTTGGGGTCCAATACTTTCTATGCTTAAGGATGATAATTTGCCAAATTGTGTTTCACACAGAACTTTGGAGAAAAGCTGCAAAAAGTTTTGCAATGCCTTTCGTGAAGTGTACAGGACCCAGTCGGGGTGGTGTATCCAAGACTCTCAACTTCGTGAGGATCTACAAATTTCTGTTTCTCTGAAAGTGGTTCTTGCATACGGATCATACACTGGAAGAAACTCATCAAACATTGCAGATAAGTATATCAAGTACACTGTTGAGGATCTACAAAGTTATATTTTGGACCTTTTTCAAGGGTCGTCAAAATCTTTGCGCTACACTCATCAAAGAAATTGA 1914 0.4138 MEEHKPVISTCEQDQHVVAAAQHILKALAASKNVSSDLRKTLLDVESQLSAISIVNERKGRGIKPLENRLKCVEDKVTRWVANPSMTWDSSPNQSSNYLRVVGEIQTLIQSLESFSVVNDNGRQKELLERAYAVLQDAMSRLERELDHILVEHKQYFEPEYMSFDSKMDMAYDESFRAVENEQVNEVIRSTGSSQSEANIVDLMNPAVLEYLKSIANVMFDSKYHQEFCQVFISSRRDALAEYFVILKMGKLSIEDVLKLEWQCLNHEMKKWIRAMKIIVQVYLVSEKRLCKHILGDFGSFYQCCFSEISQSFMLLLLNFGEAVAMGTHSPERIFRLLDMHEVLEHLSVDVDKLFFEEVGAFVRGEFHKLLTSIGDTIKSTFLAFRNAIATNHSKTPFPQGGVHHVTKYVMNYIMTLGEYGDTLNLLLVEEYSNDPAVYEQETSALSLCPVAFYFRSITTALESNLSNKSKLYKDVALQHIFMMNNIRYMVQKVKCSDLSHYFGDCWLRQHTAEYQRDARCYERVTWGPILSMLKDDNLPNCVSHRTLEKSCKKFCNAFREVYRTQSGWCIQDSQLREDLQISVSLKVVLAYGSYTGRNSSNIADKYIKYTVEDLQSYILDLFQGSSKSLRYTHQRN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7724g00009 637 SUPERFAMILY Cullin repeat-like 89 623 IPR016159 -
Vium7724g00009 637 Gene3D Exocyst complex component Exo70 84 632 - -
Vium7724g00009 637 Pfam Exo70 exocyst complex subunit 270 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium7724g00009 637 Coils Coil 125 152 - -
Vium7724g00009 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 625 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7724g00009 Vium-Chr7724 89812 92999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7724g00009 1 624 EXO70 exocyst subunit family AT5G61010 41.587 1.40e-169 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7724g00009 K07195 - gmx:100791622 967.222