Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7706g00007 ATGACGACGATACGCAGATTCTGCTGCAACGATCTTCTTCGCTATGCCTCCGTCAATCTTGACCATCTAACGGAAACCTTCAACATGTCCTTCTACATGACCTATCTTGCAAGATGGCCAGACTATTTTCATGTTGCTGAAGGTCCTGGAAATCAAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAGTCTTGGCATGGTCATGTAACTGCAGTAACAGTTGCTCCAGAGTATCGCAGGCAGCAGTTAGCGAAAAAACTTATGAATCTGCTGGAAGACATTAGTGACAATATTGACAAGGCTTACTTTGTTGATCTCTTTGTGAGAGCATCAAATGCGCCAGCCATCAAGATGTATGATAAGCTTGGCTATGTGATTTATCGACGGGTGCTACGGTACTATTCTGGTGAAGAAGATGGTTTAGATATGAGGAAGGCTTTGTCTCGTGATGTTGAAAAGAAGTCCATTATCCCTCTTAAACGGCCAGTGACTCCTGATGAGTTAGAGTATGACTAA 525 0.4324 MTTIRRFCCNDLLRYASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNQIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYDKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7706g00007 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Vium7706g00007 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Vium7706g00007 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Vium7706g00007 174 Gene3D - 2 162 - -
Vium7706g00007 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Vium7706g00007 174 CDD NAT_SF 43 97 - -
Vium7706g00007 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium7706g00007 Acetyltransf_1 8.8e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7706g00007 K17972 - gmx:100306394 352.443