Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7706g00001 ATGATGCCAAACATGCCGCGAACTGGAGAAAGAAGAAGAAAAAGATACAACCTTAGCCGCTTGAACTTGAACCTATGTTTCTCAGTTCCCATGCAATCGTTCACACCACAATCTTCCCCTGCTGCCACCTCTTCAACCGTTCTTCAGAATCAAAACAAAAAACCTTTATCACAACCCGCCACGTCACCGTCCCCGATCAAGAACTTCAACTACGACCCTACTAACCCATTCCCGAATCTCGGACCCGAACCCGAACCTGCTGAGCTGGCCTCCGCTTTCGTCTCCCACCGCTTCTTCTTCACTTACCCCGGCCGCTCCAACTCCATCGTCGAATCCACCATCACCGACACCGATTGCGCTACCTCCTCGTCCTCGCTGGGAAATCCAGTCGCCACCGTCGACGAAAAGGCGAAAACGGCGCTCGAAGGCAGCGTTGCGGTAGAGATGTACTCGCTGGACCCCTACGAGGATTTCCGGCGCTCCATGGAGGAGATGGTTGCGGCGAGTCCCGAGTTGATCGACGTGGAGGCTAATTGGAAAGAGCTTCTTTTCTGCTACCTCGCGCTCAACCCGAGGAGCACGCACAAGTTCATCCTCTGCGCTTTTTCTGATCTTCTTCTAAGCCTCATGTCGCACTCTTCTCCTCCGCCGCAGGATGACGGTGCCGGCGATGTTGCCATCGGTGGCGATGGATGTTCGAATTAG 705 0.5433 MMPNMPRTGERRRKRYNLSRLNLNLCFSVPMQSFTPQSSPAATSSTVLQNQNKKPLSQPATSPSPIKNFNYDPTNPFPNLGPEPEPAELASAFVSHRFFFTYPGRSNSIVESTITDTDCATSSSSLGNPVATVDEKAKTALEGSVAVEMYSLDPYEDFRRSMEEMVAASPELIDVEANWKELLFCYLALNPRSTHKFILCAFSDLLLSLMSHSSPPPQDDGAGDVAIGGDGCSN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7706g00001 234 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 51 211 IPR038933 GO:0045892
Vium7706g00001 234 MobiDBLite consensus disorder prediction 37 84 - -
Vium7706g00001 234 NCBIfam uncharacterized plant-specific domain TIGR01568 145 210 IPR006458 -
Vium7706g00001 234 MobiDBLite consensus disorder prediction 214 234 - -
Vium7706g00001 234 ProSiteProfiles OVATE domain profile. 147 208 IPR006458 -
Vium7706g00001 234 MobiDBLite consensus disorder prediction 37 75 - -
Vium7706g00001 234 Pfam Transcriptional repressor, ovate 151 209 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7706g00001 Vium-Chr7706 3291 4136 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium7706g00001 Ovate 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7706g00001 - - pvu:PHAVU_001G153000g 363.614