Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium766g00004 ATGAGAGTTGAAGTAGAAATAATTTCTAGAGAAGATATTAGACCTTCTTCTCCCACACCCTCTCACCTTAGAGTCTTCAGCCTTTCCCTTTTGGATCACCTTATCCCATCGCCATATGCTCCAATAATCCTGTTCTACAACTCACCTAAGAGTAACACAACTTACCTTTCTGAAGTCCCCAAGAGGTTACAATTGCTGAAAACATCTCTATCAGAGACACTAACCAACTTCTACCCTCTAGGTGGCAAAATCAAAGAGGATCGGTCCATTGAGTGCAATGATGAAGGTGCTAATTTTGTGCTGGCCCGAGTGAAATGTCCTCTAGATGAATTTCTAGTCCAACCTCAGGTAACCGAACTACACAAGTTTCTTCCTGTTGATCTTCTGTCTGAAGGATCAAATTCAGGAACCTATGTGACTAACATTCAAGTGAACATCTTTGAATGTGGGGGAATTGCCATTGGCATGTGCATTTCTCATAGGATCCTAGATGGAGCTGCACTAAGCACCTTTATCAAAGGGTGGACAGAAAGGGCCAAGGGCTGTAACCAATCAACCCAACCAAACTTCATAGTACCTTCTCTCTTCCCCACTTACAGTCCATGGTTTAGAGACTTATCTATGTGGATGTGGGGTTCCTTGTTCAAACAGGGCAAGTGGGTCACAAGGAGGTTTCTGTTTAGAAACTCAGCTATTGCCACAGTCAAGGCTCAAACACCAGGCACAGAAAATTCCACACGTCTGCAGATGGTTTCTGCTATGCTGTGGAAGTCCCTCATGGGGGTGTCCAAGGCACGGTTTGGCACCCAAAGGCCTTCTTTTGTTACTCATCTGGTGAACCTGAGGAGAAAAATGGACGAGGCTCTTTGTCCTGAACATGCTATGGGAAATCTTCTTTGGTTGATGGCTGCAGAGAGTGTGGATGATAATGAGATGGGGTTGGAGGAGTTGGTGGGGAAGTTGAGGACTGCAATATCAAGAGTAGATAAGGAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGTCAACTATGCAGGAAAGTCTTAGGGCAATAGGTGAGATGGGATCAAAGAGTGAAGTGGATTATTTTGGGTTTAGTAGTTGGTGCAATTTTAGGTACTACGAGGCTGATTTTGGGTGGGGAAAACCCACATGGGTGAGTGGTGGTGGTTCAATTGACTCAGTTTCAATGTTTATGAATCTTATCATCCTAGTGGACACAAGGTTGGGAGATGGCATAGAAGCTTGGGTTACCTTGGAAGAGGACGATATGAGTCATTTGAAAGCAAACCCTGAACTCCTCACTTGTGCAACACTCGATCCAAGTCCTTTAGCAATGAGTTCAGTTGCCTGA 1356 0.4432 MRVEVEIISREDIRPSSPTPSHLRVFSLSLLDHLIPSPYAPIILFYNSPKSNTTYLSEVPKRLQLLKTSLSETLTNFYPLGGKIKEDRSIECNDEGANFVLARVKCPLDEFLVQPQVTELHKFLPVDLLSEGSNSGTYVTNIQVNIFECGGIAIGMCISHRILDGAALSTFIKGWTERAKGCNQSTQPNFIVPSLFPTYSPWFRDLSMWMWGSLFKQGKWVTRRFLFRNSAIATVKAQTPGTENSTRLQMVSAMLWKSLMGVSKARFGTQRPSFVTHLVNLRRKMDEALCPEHAMGNLLWLMAAESVDDNEMGLEELVGKLRTAISRVDKEFVEELRGDKGRSTMQESLRAIGEMGSKSEVDYFGFSSWCNFRYYEADFGWGKPTWVSGGGSIDSVSMFMNLIILVDTRLGDGIEAWVTLEEDDMSHLKANPELLTCATLDPSPLAMSSVA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium766g00004 451 PANTHER F21J9.9 6 434 - -
Vium766g00004 451 Pfam Transferase family 4 434 - -
Vium766g00004 451 Gene3D - 1 201 IPR023213 -
Vium766g00004 451 Gene3D - 218 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium766g00004 Vium-Chr766 78436 80020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium766g00004 3 391 Monolignol Biosynthesis Gene Families AT5G48930 25.183 3.93e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium766g00004 - - gmx:100305374 736.102