Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7663g00008 ATGCAATTTTCCTATTCCATGTTTTTCCCCTCAAAATCCAACTTCTCTCCTGTTCGCCCCACCCTCCCTCCGGTTCGCTGCGGCATCCGCGAGCTCCGCCAACGAATCCACACTGTCCAGACCACGCAAAAGATCACCGAAGCTATGAAGCTCGTTGCCGCCGCTAGGGTCCGTCGCGCTCAGGAGGCCGTCGTCAACGGCCGCCCCTTCGCCTCAAACCTCGCAGAAATGCTGAACGACATCACCCAGCGCCTAAAAAGCGACGACGTTTCCACCCCCGTCACTGATGCCAGACCCGTCAAGACCGTCGCCCTTGTCGTTTTCACCGGCGACCGCGGCCTCTGCGGCGGTTTCAACAAATGGGTAATAAAAAAAGCCGTCACCCGAATCGAGGAGCTGAAGAAACTCAATCTGGGGGAGGTTTATGATGTGAAAGATGATGTTTTTAGGTTGAGTTCTAAGGAGGGGAAGCTGGCTGTGGAGAGGGATGTTGTGAGGTTGAGGAAAGAGGGTGAGGTGTTTTCCCCTCTTATGGAGTTTGAACAGGATCCTGTTCTCATTCTTGATGCCATGTTACCTCTTTATTTGAATAGTCAGATTTTGAGGGCGTTGCAGGAGTCTGTAGCTAGTGAGCTTGCTGCAAGGATGGGGGCCATGGCTTCTGCCACCGATAACGCTGTTGAATTGAGTAAAAGACTTTCGGTTGAATACAACCGGGAGCGGCAGGCGAAGATCACAGGGGAGTTGCTGGAGATTGTGGCTGGAGCCGAGGCTCTTACACCAATTGACTTATGA 795 0.5296 MQFSYSMFFPSKSNFSPVRPTLPPVRCGIRELRQRIHTVQTTQKITEAMKLVAAARVRRAQEAVVNGRPFASNLAEMLNDITQRLKSDDVSTPVTDARPVKTVALVVFTGDRGLCGGFNKWVIKKAVTRIEELKKLNLGEVYDVKDDVFRLSSKEGKLAVERDVVRLRKEGEVFSPLMEFEQDPVLILDAMLPLYLNSQILRALQESVASELAARMGAMASATDNAVELSKRLSVEYNRERQAKITGELLEIVAGAEALTPIDL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7663g00008 264 FunFam ATP synthase gamma chain, chloroplastic 27 94 - -
Vium7663g00008 264 FunFam ATP synthase gamma chain, chloroplastic 154 259 - -
Vium7663g00008 264 ProSitePatterns ATP synthase gamma subunit signature. 245 258 IPR023632 -
Vium7663g00008 264 Gene3D - 171 217 - -
Vium7663g00008 264 Gene3D ATP synthase, gamma subunit, helix hairpin domain 218 258 - -
Vium7663g00008 264 Pfam ATP synthase 173 259 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vium7663g00008 264 Pfam ATP synthase 29 132 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vium7663g00008 264 PANTHER ATP SYNTHASE GAMMA CHAIN 139 259 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vium7663g00008 264 CDD F1-ATPase_gamma 29 256 IPR000131 GO:0015986|GO:0045261|GO:0046933
Vium7663g00008 264 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 28 259 IPR035968 GO:0015986|GO:0045261|GO:0046933
Vium7663g00008 264 Gene3D ATP synthase, gamma subunit, helix hairpin domain 30 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7663g00008 Vium-Chr7663 40137 40940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7663g00008 139 259 Primary Pumps ATPases AT1G15700 72.951 2.32e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7663g00008 K02115 - gmx:100797879 207.994