Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7654g00003 ATGCCGAAGTCGAAGAGAAATAAACAAGTTACGCTATCGAAGACGAAGAAGAAGGGAAGGGATCATAAAGAGGCGATAGTGAATGGAATAAAGGAGGCTGCAGAAAAGTACGAGTGCGTATACGTGTTCTCGTTCGAGAACATGAGGAATCAGAAATTCAAGGAGTTTAGGGAACAGTTGAAATCTAGTAGCAGGTTCTTTCTCGGCTCTAACAAGGTAATGCAAGTTGCCCTAGGTCGCTCCGCCGCCGATGAGATCAGTCCCGGCATTCATAAGGTTTCAAAGCTATTGCGCGGAGATGCTGGCATGGTTTTTACGAATTTGTCTAAGGAAGAGGTTGAAAGGCTGTTTAAGGAATTTGAAGAATACGATTTTGCAAGAACAGGAAGCCTTGCCACGGAAAAGGTTGATCTCAAAGAAGGAGCCTTGGAGCAGTTTACGCATGAGATGGAACCTTTTCTACGAAAGCAAGGCATGCCTGTTCGATTAAATAAAGGAGTTGTGGAGCTTGTTTCCGATTTTGTTGTTTGTGAGGAAGGGAAGTCATTGTCACCTGAAGCTGCTCGTATACTGCGTTTAATGGGAATCAAGATGGCTACATTTCGTCTTCACCTAATTTGCAGGTGGAGTCGTGATGACTTTGAGCTATACATCGATGGACCGGATGAATCAGATGTTGAATGCTCATAG 690 0.4406 MPKSKRNKQVTLSKTKKKGRDHKEAIVNGIKEAAEKYECVYVFSFENMRNQKFKEFREQLKSSSRFFLGSNKVMQVALGRSAADEISPGIHKVSKLLRGDAGMVFTNLSKEEVERLFKEFEEYDFARTGSLATEKVDLKEGALEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKSLSPEAARILRLMGIKMATFRLHLICRWSRDDFELYIDGPDESDVECS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7654g00003 229 Gene3D - 30 212 IPR043141 -
Vium7654g00003 229 MobiDBLite consensus disorder prediction 1 21 - -
Vium7654g00003 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Vium7654g00003 229 FunFam Ribosome assembly factor mrt4 29 131 - -
Vium7654g00003 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
Vium7654g00003 229 SUPERFAMILY Ribosomal protein L10-like 20 142 IPR043141 -
Vium7654g00003 229 MobiDBLite consensus disorder prediction 1 16 - -
Vium7654g00003 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Vium7654g00003 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Vium7654g00003 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Vium7654g00003 229 Gene3D - 125 198 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7654g00003 Vium-Chr7654 5000 7180 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7654g00003 35 217 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.311 3.83e-11 60.1