Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7650g00001 ATGAGTCCAAAGAAATGGTTTAAGAGGATTGTTAAATTGAAGAAACGGAAGGAAGATAAATCGGAACAAGCTAAGGTGCAATTCGCCCCTGAAAACTTAGATGAGTCCTCCGAAGAAAAGCAAGACGAAACTCTTGAAGAGTCAAATAGCATTCCTAATGAAAATTTGGTGGTGCTAGAAAAGACAGTTCCCAGCAGGTTGATGGAAGATATTGCTGCTACTCGGATTCAAAATGCATTTCGTGCATTTCTGGCAAGAAGAACATTGCACCAGCTAAGAGATACTGCACTAAAGTATATTGCACCATCGAAGGTAGAATTGAAACTTGAGGCTGCCAAAGAACAGGCAGTGACTGCACTAACCTATATACATACTTGGAGCAGAATACAGGAACAGATTAAAGCTCGAAGACTCTATATGCTAACAGAAGCAAGGATTAAACAAAAGAAATTAGAAAACCAGCTAAAACTTGCAGCTAAGATTCATCAGCTTCAGGTGGGATGGTGTGGAGGTTCTGACACAATGGAAGAGATACTTTTGAGGATACATCAGAGAGAAGAAGCAGCAGTCAAACGAGAGCGAGCTATGGCATATGCCTTCTCTCATCAGTGGAGGCCCAATTGCAGGCAGTATTTGGGCCAGGCTATCTACAGCGTTGGCAAAGAAAGCTGGGGTTGGAGCTGGAAGGAGAGATGGGTAGCAGCTCGTCCATGGCAAATCCGGGTTCGTTTTCCTGACCCCATCACAACGAAAACCACTGACAGCAAAGTCCCATTGTCTAATTCTGAGTTGTCAAATACAAAGGAAACTCCGAAAGGGAAAGAAAACAACATTCCAGATCTGTCTAACAACAATCTAGCCAAATAA 867 0.4268 MSPKKWFKRIVKLKKRKEDKSEQAKVQFAPENLDESSEEKQDETLEESNSIPNENLVVLEKTVPSRLMEDIAATRIQNAFRAFLARRTLHQLRDTALKYIAPSKVELKLEAAKEQAVTALTYIHTWSRIQEQIKARRLYMLTEARIKQKKLENQLKLAAKIHQLQVGWCGGSDTMEEILLRIHQREEAAVKRERAMAYAFSHQWRPNCRQYLGQAIYSVGKESWGWSWKERWVAARPWQIRVRFPDPITTKTTDSKVPLSNSELSNTKETPKGKENNIPDLSNNNLAK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7650g00001 288 MobiDBLite consensus disorder prediction 251 288 - -
Vium7650g00001 288 MobiDBLite consensus disorder prediction 251 267 - -
Vium7650g00001 288 ProSiteProfiles IQ motif profile. 69 98 IPR000048 GO:0005515
Vium7650g00001 288 Coils Coil 141 161 - -
Vium7650g00001 288 MobiDBLite consensus disorder prediction 19 51 - -
Vium7650g00001 288 PANTHER IQ-DOMAIN 5-RELATED 5 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7650g00001 Vium-Chr7650 21436 28087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7650g00001 65 263 IQD Protein Family AT3G15050 51.163 2.11e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7650g00001 - - gmx:100810603 388.652