Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00065 ATGAAGAATGGTACCTTGTATGATCATTTGCATGAAAATGGTAGCAATGCGTTGAATCGGTGGAAAATGAGGATCACTATTGCTTTGGATGCTTCCCGAGGAATAGAATATCTTCATAAGTATGCAGCTCCACTATTTCTTCACGGGCACGTCAAGTCTTCCAACATTCTTCTTGATGCCACTTGGCTGGCAAGAGTGTCTGATTTTAAATTGTGTTTGATGAGTCCAGAAGCTGAGCGTGATTACCGACGAATAAAGGTAGGAGGAACAGTTGGATACATTGATCCTGAGTACTATGATCTAAATACGTTGACAGCAAAGAGTGATGTGTATGGGCTGGGAGTTGTATTGCTAGAGCTTTTAACAGGAAAGAAAGCTATATTCCTTGATGGGGAAGATGAAGTTACCTTAAGTGTGCACCGTTTGGTGGACTTTGCCGTGCCTGCCATTTTGGATCCTAGGGTTGGACCACCGGGTGTGAATGAGATAGAGGCATTGGAGTTGGTGGCCCAAACAGCCCTCCATTGCGTGAATCGGAAAGGTAAAGATAGACCATCCATGGCTGATTTGTGA 573 0.4398 MKNGTLYDHLHENGSNALNRWKMRITIALDASRGIEYLHKYAAPLFLHGHVKSSNILLDATWLARVSDFKLCLMSPEAERDYRRIKVGGTVGYIDPEYYDLNTLTAKSDVYGLGVVLLELLTGKKAIFLDGEDEVTLSVHRLVDFAVPAILDPRVGPPGVNEIEALELVAQTALHCVNRKGKDRPSMADL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00065 190 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 1 189 IPR044815 GO:0004674
Vium764g00065 190 Pfam Protein tyrosine and serine/threonine kinase 1 134 IPR001245 GO:0004672|GO:0006468
Vium764g00065 190 SUPERFAMILY Protein kinase-like (PK-like) 1 190 IPR011009 -
Vium764g00065 190 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium764g00065 190 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00065 Vium-Chr764 483583 485113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00065 1 190 Receptor kinase-like Gene Family AT3G55950 60.190 4.61e-69 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vium764g00065 PK_Tyr_Ser-Thr 1.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00065 - - vum:124823371 377.481