Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00063 ATGAAAACACCACCTTCCTCCTCCGTGCCCCTCTGTCTCGTCGTCGCCGCCCTGCTTATACTCTCTCTGCCACGCTCTTCCCATGGCCTCGGCTCCGGCGCTACCCTTGCCGTCTCTGACGCCTCCACCACCGTGTGCGCCGTCGTGGCAGGCGAGTCCATTCGCCGCATTCAGTGTTACCGTCAGGGGCAGAATGTCTACATCATTCCCAACGTTAGTTTTTCAATGATTTCGGGTGGGAGGAACTACTTCTGTGGTCTAAGGTCAAGTAACTCCGATTTGATTTGTTGGAACACAAGCTCTTCCTTCGAAAGGAGAAGGCTTTACAACGATAGTTCTGTTCCATTGGAGAATCTGGCCGTTGGGGATACCCACGTTTGCTCCACCGAGGTGGGTGGTGGCACTTCCAAGTGCTGGAGAACCGGTGACACGTTTCGGCTTCCTTCTGTGACTGATACATTCTCTTCAATCTCATCTGGGTCTGGCTTCTCTTGCGGAATTTTGAGGAATAATTCACGGGTTCGGTGCTGGGGAGACACCAGCGTTTCGGATTTATCGGGACGGATTGAGAATGTATTTGGGAACATGTCCATGCTGAGTCTTGTCGCAGGTGGTTCACATGTTTGTGGATTGAACTCAACGGGGTTTGTGGCATGTGGAGGAAATATCGATTCTGGACAACTTGATTTTCCTCAAGGTGGGGCTTTTGAGTATTCTGCGGTGGCGCTTGGAGCCGAACATGGCTGTGCTATAAGAGGATTGAATGGTTCGGTTGTGTGTTGGGGTGGCAATGGGGGATTCTCGGGGACTAATGTTACCGATGGAGTTTCCTTTGAGGTAATTGTTTCTGGGTCTAATTTTGTTTGTGGATTGACAACAAACAATTTGACAGTGGTGTGTTGTCCTGATTGGTCTAATAGTTTGACGTTTGAGCTTCCTTTTCCACCTGTTCTTCCAGGGTCTTGTGTTCAATCTTCCTGTGGAGAGTGTGGTTCATATCTTGATTCTCAATCTCTATGCTCTGGCTCTGGTAACATTTGTAAACCAATGACTTGTAAGCCTCAAACAACAGCTCCACCGCCGCCATCACCGTCACCGCCTCCACCATCAATGTCACCGCCGCCACCATCACCACCACCGCCACCACCTTCGTCAACTCGATCAAAGACCTTGACAAACGGGTTATTGGCATTTGCTATTATCGGTTCTGTGGGAGCTTTTGCTGGAATATGCACTATAGTTTATTGCTTGTGGAGTGGAGTTTGTTTTGGGAAGAAGAAAGTTCACAATTCTGTGCAGCCTACAATCACAAGAGGTAGCAGTGGTTCAAACGGTGGGGGTGCTTCTAATAATAGCAATTCTTCAATATCGTCTATGATTATGCGTCAGACTTCAATGATAATGAGACGCCAGAGGAGTGGAACGTCATCAACGAAGCACCCAGACAGGGCCGAGGAGTTCACCCTGGCCGAGCTTGTGGCAGCCACCGACAATTTCTCACCAGAAAACAAGATCGGAGCTGGAAGCTTTGGTGTTGTGTACAAAGGTAAACTCGCGGATGGACGCGAGGTGGCAATCAAGAGGGGTGAAACCGGTTCCAAGATGAAGAAGTTTCAAGAGAAGGAAAGTGCATTCGAGTCTGAATTGGCTTTCTTGTCTCGCCTACACCACAAGCACTTGGTTGGACTGGTCGGGTTCTGCGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGGGCGCTGTATGATCATTTGCATGACAAGAACAACGTGGAGAAGGGTAACAGTGTGTTGAATTATTGGAAAATGAGGATAAAAATTGCTTTGGATGCTGCCCGGGGAATAGAGTATCTTCATAATTATGCAGTTCCATCAATTATTCACAGAGACATAAAGTCTTCTAACATTCTTATTGATGCTACTTGGACGGCAAGAGTATCAGATTTTGGATTGTCTATGATGAGTCCAGAACCCGACCGTGATCACCGACCAATGAAGGCAGCAGGAACCGTTGGATACATCGATCCGGAGTACTACGGTTTAAATGTATTGACGGCAAAGAGTGATGTGTACGGGCTGGGAGTTGTACTGCTGGAACTTTTAACAGGAAAGAGAGCTATATTCAAGTATGGGGAAGATGGAGGCAGCCCACTGAGTGTGGTGGACTTTGCAGTGCCTCGTATATTGGCTGGAGAATTGGTGAAAATTTTGGATGCAAGGGTTGGACCACCCGATGTGAACGAGGCAGAGGCAGTGGAATTAGTGGCCTATACAGCTGTCCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGTCAATTTAGAGAGAGCTTTGGCTATTTGTGAGAGTAGCCACGATACCATTTCCAGTGGCTCTATCTCTGTTGTTTCAGAATGA 2427 0.4788 MKTPPSSSVPLCLVVAALLILSLPRSSHGLGSGATLAVSDASTTVCAVVAGESIRRIQCYRQGQNVYIIPNVSFSMISGGRNYFCGLRSSNSDLICWNTSSSFERRRLYNDSSVPLENLAVGDTHVCSTEVGGGTSKCWRTGDTFRLPSVTDTFSSISSGSGFSCGILRNNSRVRCWGDTSVSDLSGRIENVFGNMSMLSLVAGGSHVCGLNSTGFVACGGNIDSGQLDFPQGGAFEYSAVALGAEHGCAIRGLNGSVVCWGGNGGFSGTNVTDGVSFEVIVSGSNFVCGLTTNNLTVVCWXPDWSNSLTFELPFPPVLPGSCVQSSCGECGSYLDSQSLCSGSGNICKPMTCKPQTTAPPPPSPSPPPPSMSPPPPSPPPPPPSSTRSKTLTNGLLAFAIIGSVGAFAGICTIVYCLWSGVCFGKKKVHNSVQPTITRGSSGSNGGGASNNSNSSISSMIMRQTSMIMRRQRSGTSSTKHPDRAEEFTLAELVAATDNFSPENKIGAGSFGVVYKGKLADGREVAIKRGETGSKMKKFQEKESAFESELAFLSRLHHKHLVGLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVEKGNSVLNYWKMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSMMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKYGEDGGSPLSVVDFAVPRILAGELVKILDARVGPPDVNEAEAVELVAYTAVHCVNLEGKDRPTMADIVVNLERALAICESSHDTISSGSISVVSE 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00063 809 Gene3D Transferase(Phosphotransferase) domain 1 581 801 - -
Vium764g00063 809 Gene3D Phosphorylase Kinase; domain 1 459 580 - -
Vium764g00063 809 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 195 795 IPR044815 GO:0004674
Vium764g00063 809 ProSiteProfiles Protein kinase domain profile. 500 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium764g00063 809 MobiDBLite consensus disorder prediction 354 390 - -
Vium764g00063 809 SUPERFAMILY RCC1/BLIP-II 43 265 IPR009091 -
Vium764g00063 809 Pfam Protein kinase domain 502 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium764g00063 809 SUPERFAMILY Protein kinase-like (PK-like) 477 785 IPR011009 -
Vium764g00063 809 MobiDBLite consensus disorder prediction 434 459 - -
Vium764g00063 809 FunFam Serine/threonine-protein kinase-like protein CCR4 581 803 - -
Vium764g00063 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Vium764g00063 809 Gene3D - 104 359 IPR009091 -
Vium764g00063 809 FunFam serine/threonine-protein kinase-like protein CCR1 469 580 - -
Vium764g00063 809 MobiDBLite consensus disorder prediction 355 387 - -
Vium764g00063 809 SMART serkin_6 500 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium764g00063 809 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00063 Vium-Chr764 473852 477161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00063 1 809 Receptor kinase-like Gene Family AT3G55950 58.675 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vium764g00063 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00063 - - vra:106757659 1465.29