Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00051 ATGGGAGATAAAAGGTTCAGAAATCATGGAAAAAACTTTAGAATGGTTTCCATTGTGACTATGGAAAACTACTATGATTCTGGCTGGCACATGAGCACCAGCTGGGCTCAATGCAGTGATCATTCTTCTTCCTTTGCAGTTCCTACACAAATACTTCCTCATGCCACTGACTCTGCCTCTCTTCAATTTGGTGAGTTCCACTCATGGCCACTTCCCATTGAAGGGGCCGAAGAAGAGAGAGCAATGAGTGCTTCCAAGAGCCACAGCCAAGCTGAGAAAAGGCGCAGAGACAGAATCAATGCACAGCTTGCAACTCTCAGAAAACTTATTCCCAAATCCGATAAGATGGACAAGGCAGCTTTACTAGGGAGTGTGATAGACCATGTCAAAGATCTAAAGAGAAAAGCCATGGATGTTAGCAGAGCTTTCACAGTTCCAACTGAAATTGATGAAGTATCAATTGACTGTGACCATGTAGAAGATGAAAGCTGCACTAAAGTGAACAAATTGAAGGAGAATATTGTGATCAAAGCTTCTGTTTGCTGCGATGATCGACCAGAACTGTTCCCTGAACTCATCCAAGTCCTCAAGGGCTTGAGACTGACGGCAGTTAAAGCTGACATAGCCAGTGTAGGTGGCCGGATCAAAAGCATATTGGTGCTTTGTTCTAAGGATAGTGAAGAGGGTGTTTGCCTCACCACTCTCAAACAGTCCCTCAAATCTGCTGTCACCAAAATAGCTTCATCATCCATGACATCTAATTGCCCCACCAGAAGTAAGAGGCAGAGATTCTTCTTGCCTTCTCGTTGCCTACAGTAA 819 0.442 MGDKRFRNHGKNFRMVSIVTMENYYDSGWHMSTSWAQCSDHSSSFAVPTQILPHATDSASLQFGEFHSWPLPIEGAEEERAMSASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDCDHVEDESCTKVNKLKENIVIKASVCCDDRPELFPELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEEGVCLTTLKQSLKSAVTKIASSSMTSNCPTRSKRQRFFLPSRCLQ 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00051 272 PANTHER TRANSCRIPTION FACTOR BHLH30 74 266 IPR045847 GO:0003700|GO:0006355
Vium764g00051 272 MobiDBLite consensus disorder prediction 77 97 - -
Vium764g00051 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 132 IPR011598 GO:0046983
Vium764g00051 272 CDD bHLH_AtAIG1_like 78 155 - -
Vium764g00051 272 MobiDBLite consensus disorder prediction 79 97 - -
Vium764g00051 272 Gene3D - 77 141 IPR036638 GO:0046983
Vium764g00051 272 Pfam Helix-loop-helix DNA-binding domain 86 132 IPR011598 GO:0046983
Vium764g00051 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 135 IPR036638 GO:0046983
Vium764g00051 272 SMART finulus 89 138 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00051 Vium-Chr764 366874 368528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00051 21 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 42.045 1.73e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vium764g00051 HLH 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00051 - - gmx:100799687 490.73