Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium764g00047 | ATGGCCAGCCCAGATACCCGACCATTCACTTGGCACTACACAGAAATCGATGACAGAGACCTAGAGATCCGAGGAAGGACTTTGTTCTTCGTCATCGTACTCTTCTCCATTATCCTTCTCGTCACGGTTCTCTTCATATACACGCGCTGGGTTTGTCGCTACCAGGGGCTCCTTCCCACCACAGCGTTTTCCGCCGCTACCCACGCGCCGTCACTCCCGCAGTCTCAGGGACTGGACCCCGCAACCCTCAAGAAATTGCCCATAATCCTTCACCACGCGCCCTCGGATCGCGACGAAAGTTCGTGGGACGAAACGGAGTGTTGCATCTGCCTCGGCGAGTTCAGAGACGGCGAGAAAGTGAAGGTTTTGCCGGCGTGCGACCATTATTTCCATTGTGAATGTGTTGATAGGTGGCTCACTCACCACTCAAGTTGCCCTCTCTGCAGAGCTTCTCTCAAGGTTGAATCTTCTTTCCCAAAGATTTTGATTCAGGAACCACCTCTCAGAATTGATTTTCAGTTCTAG | 525 | 0.5238 | MASPDTRPFTWHYTEIDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGLLPTTAFSAATHAPSLPQSQGLDPATLKKLPIILHHAPSDRDESSWDETECCICLGEFRDGEKVKVLPACDHYFHCECVDRWLTHHSSCPLCRASLKVESSFPKILIQEPPLRIDFQF | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium764g00047 | 174 | CDD | RING-H2_EL5-like | 106 | 149 | - | - | |
Vium764g00047 | 174 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 155 | IPR013083 | - | |
Vium764g00047 | 174 | Pfam | Ring finger domain | 106 | 149 | IPR001841 | - | |
Vium764g00047 | 174 | SUPERFAMILY | RING/U-box | 98 | 155 | - | - | |
Vium764g00047 | 174 | FunFam | RING-H2 finger protein ATL66 | 70 | 154 | - | - | |
Vium764g00047 | 174 | ProSiteProfiles | Zinc finger RING-type profile. | 107 | 149 | IPR001841 | - | |
Vium764g00047 | 174 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 28 | 156 | - | - | |
Vium764g00047 | 174 | SMART | ring_2 | 107 | 148 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium764g00047 | Vium-Chr764 | 341418 | 342598 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium764g00047 | 11 | 157 | C3H Transcription Factor Family | AT3G11110 | 44.000 | 1.00e-37 | 125 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium764g00047 | - | - | gmx:100803278 | 338.576 |