Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium764g00038 | ATGAACAAAAACTGGAAATCCAGCTGCTTCAGGGATCCTTTGTTCCTTCTAGCGTTGTGTTTGTTCTTTCAGAACTTTAGTTCCTGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTCTGAAGTTCAAGCAGGGAATAGTAAGAGACCCTTTTGGTGCTTTGTCAAATTGGGTTAACGATGAAGTAGCAGTTAACCATTGTAATTGGTTTGGAGTTGAGTGCTCTGCTGGAAGAGTGGTAGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGCTCGCGAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACACTTGGATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACATCTACCTACAGATCTTGGGAATAATATTTCGCTAACAATCCTTTTGTTGGACAACAATGAACATCTCTGTGGTTTCTCTCCTGAAATTAATAAATTGATGTTGATTTCTGAATATCAAGTAGACGAAAGACAACTGAGTCTGGCAGCAAAAGTGCCAGCTTGTACAAGAAGATTCATCAAACGGCACATTGGCAAAAATAAGAAAGGTTTAAGGAGGCTACTGCAATCTTCTCGTGATAGCAATTCTTTTAACCGTGCTGCTAGGTTTCCTGATAGTCCTCCTCCATCTTCTTCAGCTCCCTCACCGGCCCCAGCAACACCGCCACCGGTTGAGGAACCAACTTTCACTGACCGAAATGATTCTGCTTCTCCTTCTCCTTCTCTGCCTGAACCGCGCTCTGGCTCATCAGATAGCAGTGGATCATCAGATAGCAATGTTGTTGCTATTTTGGCTGGAGTTATAGGTGGTGTTGTATTTCTTGTCATTTCAATCATTGGCATATATCTCTGCAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCGACAGGATTAAGTGGACAGCTTCAGAAGGCATTCATAACAGTGTACAAAGGGACTTTGTCCACTGGTGTTGAAATAGCCGTGGCCTCTGTTGCAGCGACATCATCAAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCAAATGGAACACTCTTTGAGCATTTGCACATAAAAGAAGCTGAGCACTTGGATTGGGAAACAAGACTCAGAGTTGCCATGGGTATGGCTTACTGCCTACAACATGTGCACCAGTTGGAGCCTCCTTTGGTTATTGGCAACCTGAATTCTTCAGCGGTTCAACTCACGGATGATTGTGCTGCCAAAATCTCTGATTTGAGTTTCTTAACTGAAATAGCTTCAGCTGTGATGAAATCTTCTGCTAGACAACACCCTGACATGACCCCAGCAAGTAACATTTACAGTTTTGGTGTTATATTATTTGAAATGGTGTCAGGCAGGCTCCCTTATTCAGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACAATATTTACATGGGGATCAGCCCCTCAAAGAAATGGTGGATCCATCTCTGGCGTCCTTCCAACAAGAACAGCTGGAACAAGTTGATGCTTTGATCAAATCTTGTGTCCACCCTGATCCAAAGCAAAGACCAACTATGAAAGAAATTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCCGAGGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCGGAGCTTGAGATTGCCTCGGTAAATGGAAACTGA | 1839 | 0.4225 | MNKNWKSSCFRDPLFLLALCLFFQNFSSCCSLNEEGKALLKFKQGIVRDPFGALSNWVNDEVAVNHCNWFGVECSAGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLDELEVLDLGYNNFSGHLPTDLGNNISLTILLLDNNEHLCGFSPEINKLMLISEYQVDERQLSLAAKVPACTRRFIKRHIGKNKKGLRRLLQSSRDSNSFNRAARFPDSPPPSSSAPSPAPATPPPVEEPTFTDRNDSASPSPSLPEPRSGSSDSSGSSDSNVVAILAGVIGGVVFLVISIIGIYLCKTNKVATVKPWATGLSGQLQKAFITVYKGTLSTGVEIAVASVAATSSKDWSKTLEAQFRKKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWETRLRVAMGMAYCLQHVHQLEPPLVIGNLNSSAVQLTDDCAAKISDLSFLTEIASAVMKSSARQHPDMTPASNIYSFGVILFEMVSGRLPYSVDNDGSLDDWASQYLHGDQPLKEMVDPSLASFQQEQLEQVDALIKSCVHPDPKQRPTMKEICVRLREITKITPEAAVPKLSPLWWAELEIASVNGN | 612 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium764g00038 | 612 | MobiDBLite | consensus disorder prediction | 233 | 251 | - | - | |
Vium764g00038 | 612 | MobiDBLite | consensus disorder prediction | 256 | 281 | - | - | |
Vium764g00038 | 612 | Pfam | Leucine rich repeat N-terminal domain | 33 | 75 | IPR013210 | - | |
Vium764g00038 | 612 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 580 | IPR001245 | GO:0004672|GO:0006468 | |
Vium764g00038 | 612 | MobiDBLite | consensus disorder prediction | 222 | 281 | - | - | |
Vium764g00038 | 612 | Gene3D | Transferase(Phosphotransferase) domain 1 | 405 | 593 | - | - | |
Vium764g00038 | 612 | SUPERFAMILY | Protein kinase-like (PK-like) | 334 | 581 | IPR011009 | - | |
Vium764g00038 | 612 | PANTHER | PROTEIN MALE DISCOVERER 2 | 335 | 609 | - | - | |
Vium764g00038 | 612 | FunFam | Nuclear pore complex protein NUP107 | 32 | 192 | - | - | |
Vium764g00038 | 612 | Gene3D | Phosphorylase Kinase; domain 1 | 326 | 404 | - | - | |
Vium764g00038 | 612 | Gene3D | Ribonuclease Inhibitor | 30 | 221 | IPR032675 | - | |
Vium764g00038 | 612 | ProSiteProfiles | Protein kinase domain profile. | 315 | 585 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium764g00038 | 612 | SUPERFAMILY | L domain-like | 32 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium764g00038 | Vium-Chr764 | 281367 | 285661 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium764g00038 | 9 | 583 | Receptor kinase-like Gene Family | AT5G16000 | 24.645 | 1.90e-39 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Vium764g00038 | PK_Tyr_Ser-Thr | 7.3e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium764g00038 | - | - | gmx:100784541 | 952.97 |