Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00038 ATGAACAAAAACTGGAAATCCAGCTGCTTCAGGGATCCTTTGTTCCTTCTAGCGTTGTGTTTGTTCTTTCAGAACTTTAGTTCCTGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTCTGAAGTTCAAGCAGGGAATAGTAAGAGACCCTTTTGGTGCTTTGTCAAATTGGGTTAACGATGAAGTAGCAGTTAACCATTGTAATTGGTTTGGAGTTGAGTGCTCTGCTGGAAGAGTGGTAGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGCTCGCGAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACACTTGGATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACATCTACCTACAGATCTTGGGAATAATATTTCGCTAACAATCCTTTTGTTGGACAACAATGAACATCTCTGTGGTTTCTCTCCTGAAATTAATAAATTGATGTTGATTTCTGAATATCAAGTAGACGAAAGACAACTGAGTCTGGCAGCAAAAGTGCCAGCTTGTACAAGAAGATTCATCAAACGGCACATTGGCAAAAATAAGAAAGGTTTAAGGAGGCTACTGCAATCTTCTCGTGATAGCAATTCTTTTAACCGTGCTGCTAGGTTTCCTGATAGTCCTCCTCCATCTTCTTCAGCTCCCTCACCGGCCCCAGCAACACCGCCACCGGTTGAGGAACCAACTTTCACTGACCGAAATGATTCTGCTTCTCCTTCTCCTTCTCTGCCTGAACCGCGCTCTGGCTCATCAGATAGCAGTGGATCATCAGATAGCAATGTTGTTGCTATTTTGGCTGGAGTTATAGGTGGTGTTGTATTTCTTGTCATTTCAATCATTGGCATATATCTCTGCAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCGACAGGATTAAGTGGACAGCTTCAGAAGGCATTCATAACAGTGTACAAAGGGACTTTGTCCACTGGTGTTGAAATAGCCGTGGCCTCTGTTGCAGCGACATCATCAAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCAAATGGAACACTCTTTGAGCATTTGCACATAAAAGAAGCTGAGCACTTGGATTGGGAAACAAGACTCAGAGTTGCCATGGGTATGGCTTACTGCCTACAACATGTGCACCAGTTGGAGCCTCCTTTGGTTATTGGCAACCTGAATTCTTCAGCGGTTCAACTCACGGATGATTGTGCTGCCAAAATCTCTGATTTGAGTTTCTTAACTGAAATAGCTTCAGCTGTGATGAAATCTTCTGCTAGACAACACCCTGACATGACCCCAGCAAGTAACATTTACAGTTTTGGTGTTATATTATTTGAAATGGTGTCAGGCAGGCTCCCTTATTCAGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACAATATTTACATGGGGATCAGCCCCTCAAAGAAATGGTGGATCCATCTCTGGCGTCCTTCCAACAAGAACAGCTGGAACAAGTTGATGCTTTGATCAAATCTTGTGTCCACCCTGATCCAAAGCAAAGACCAACTATGAAAGAAATTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCCGAGGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCGGAGCTTGAGATTGCCTCGGTAAATGGAAACTGA 1839 0.4225 MNKNWKSSCFRDPLFLLALCLFFQNFSSCCSLNEEGKALLKFKQGIVRDPFGALSNWVNDEVAVNHCNWFGVECSAGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLDELEVLDLGYNNFSGHLPTDLGNNISLTILLLDNNEHLCGFSPEINKLMLISEYQVDERQLSLAAKVPACTRRFIKRHIGKNKKGLRRLLQSSRDSNSFNRAARFPDSPPPSSSAPSPAPATPPPVEEPTFTDRNDSASPSPSLPEPRSGSSDSSGSSDSNVVAILAGVIGGVVFLVISIIGIYLCKTNKVATVKPWATGLSGQLQKAFITVYKGTLSTGVEIAVASVAATSSKDWSKTLEAQFRKKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWETRLRVAMGMAYCLQHVHQLEPPLVIGNLNSSAVQLTDDCAAKISDLSFLTEIASAVMKSSARQHPDMTPASNIYSFGVILFEMVSGRLPYSVDNDGSLDDWASQYLHGDQPLKEMVDPSLASFQQEQLEQVDALIKSCVHPDPKQRPTMKEICVRLREITKITPEAAVPKLSPLWWAELEIASVNGN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00038 612 MobiDBLite consensus disorder prediction 233 251 - -
Vium764g00038 612 MobiDBLite consensus disorder prediction 256 281 - -
Vium764g00038 612 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Vium764g00038 612 Pfam Protein tyrosine and serine/threonine kinase 332 580 IPR001245 GO:0004672|GO:0006468
Vium764g00038 612 MobiDBLite consensus disorder prediction 222 281 - -
Vium764g00038 612 Gene3D Transferase(Phosphotransferase) domain 1 405 593 - -
Vium764g00038 612 SUPERFAMILY Protein kinase-like (PK-like) 334 581 IPR011009 -
Vium764g00038 612 PANTHER PROTEIN MALE DISCOVERER 2 335 609 - -
Vium764g00038 612 FunFam Nuclear pore complex protein NUP107 32 192 - -
Vium764g00038 612 Gene3D Phosphorylase Kinase; domain 1 326 404 - -
Vium764g00038 612 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Vium764g00038 612 ProSiteProfiles Protein kinase domain profile. 315 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium764g00038 612 SUPERFAMILY L domain-like 32 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00038 Vium-Chr764 281367 285661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00038 9 583 Receptor kinase-like Gene Family AT5G16000 24.645 1.90e-39 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vium764g00038 PK_Tyr_Ser-Thr 7.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00038 - - gmx:100784541 952.97