Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00016 ATGGATGCTGTATCTGATGTTCAAAACAAAACATTGGTCTCTTTGATGACCGTAGTAACACAATTAACGGAGATGTGTCTTAAGCCATTAGGCCAATCCTCTCTGGGAGGAATGTTGTTTGGCCCTTCAGCTTTAGGGCAGATAAAGGTTATACACAAAACCTTGTTCCCGGTAAAGGGTAGTGCTGTGCTTAAAACACTTTCATATTTTGGCCTCATGTTCTACTACTTCTTATGGAGTGTTAGATTAGATCTTTACACGGTGTTGAAGACAGAAAAGGTAGCTGTGGTTCTTGCTATATCTGTATCCATATTTACATTTCTTATCCCTACTGGACTCTCGCTCCTGTTGAAGACCTATGTTGCAATGGAAAAAGAAGTTGCAGACTCACTTCCATATATCGGTATCTCACAGACCTATACTATATTCATTAGCATAGCAGTGCTCTTGACGGATCTCAAAGTCCTTAATACTGACATAGGACGATTAACCATATCAGTGGCAATTCTTACTGATATGACTGGCATGGTTTTGTCAATGTTTACTTTTGCAGTAATTCAGTATACGGACGGTGATATTCTCATACTAGTATTTGCTGCTCTATCCTCATTTGTATTCCTGCTTCTTATTGTATTTATGATGAGGCCAATGATACTTTGGATGGTAAAGAACCCAGGAAAAGGTTCGACTAATGAAATTTGCACTGTCGGTATCTTTGTCTTCGTTATCCTTTCTGGACTTGTCAGTGAACTAATCGGACAGCATTTTTCCATGGGACCGATAATTTTAGGTCTGTCTCTTCCAGAAGGGCCACCCATAGGAACATCTTTGATGAAAAAACTTGAGATAATGTGTATGGATTTTCTTTATCCAATCAGCCTAGCTGTTAACGGATTGGTGGTTGATATATTCAATATAAACATTAATTCTCTATGGATTATATGCCTCATTATAGTTGTGGGTTTCTTTGTAAAGATTGGTGCTGTCATGTTGCCAGGATACTATTTGAATATATCCATGAAAAAATGTTGGATCATTGGTCTCCTTCTAAATGGAAGGGGTATATGTGAGCTTGTCCTCTTCAATCTGTGGTTGGAAAGTCAGATAATAAATGAAGACGAGTTCTCTGTGATGGTTATCTCTGTTATAGTAATAAATGTTATCTTAGTAACAGTCGTAAAATTCATGTACGACCCTTCAAAACCATATAATAATGTAAGCAGATGTACAATTCAACACAGTACACGAGATTCTGAGCTCCGAATTATGGTGTGCATTGACGACAAGGAAACACTCCCTACAATCCTGAACCTGTTAGAAGCCTCCTATGCTACTAGAGAAAGCACGATTGAGGTTACAGCGTTAGTCCTAGTTGAGCTTCAAGGAAGAGCCAGACCTGTTCTTGTTTCTAACCAATCCCATGAGAGTACACATCAGGTCTTATACGGCTCAAATCATATGGATAACGCCTTGAGGCAATACGCACAACAAAATGAAGAACATGTCTCCATGAAATCTTACACTTCAATCTCCTTATTTGAAACGATGCATGATGATATTTGTAGAATATCACTGGAACGCGAGGCCAACATTTTGATCATGCCGTTCCATAAGAGGTGGGAAATCGATGGCACTGTTGAGGTTGCACATAGGTCTATCAGAACCATAAACATTAAAGTCCTCCAAAAGGCACCATGTTCTGTGGGAATTCTAGTTGATAGGGGCATCTTGGGGGCCACTCCTTCACTCTTGGGGGGAAGAGAACCATATTACGTTGTCGTGTTTTTCATTGGTGGTGCAGATGACGTGGAGACACTGGCTTATGGCGCTAGAATGGCTAGGCAAGAGTATGTGTGGGTAACTGTGGTTAGGTTCCTTCTATTTGGTGAGGAAAATTCTAAGGACAGAAAACGTGACAGTGATCTTATAGATGAATATAGATACCACAATGCTGGAAATAATAGGTTTGAGATTTTGGATGAAGTTGTGAAAGATGGGATAGATATGTCTATATGCATAAGAAGATTGGTGGATTATTTTGATCTTGTGATGGTGGGGAGGCGACATTCACAATATGCTATTCTTCAAGGACAGGATAATTGGAGTGAGTGTGAAGAGTTAGGGGTTATTGGGGACATGCTAGCATCACCAAATTTTGTCACCAAGGCATCGGTGTTGGTCATACAACAACAGAGAATGAGAAAGAGAGTTATCAAACCTAGTGTCAATTTGAATCGGATGTCAAAAGATCAACTCATGCATAGTGTTCCAACTAACGACTCGTTAAGTCCTTCGTGTACTATTTTGGTAGACAAGAATGACAAAATGTAA 2331 0.3955 MDAVSDVQNKTLVSLMTVVTQLTEMCLKPLGQSSLGGMLFGPSALGQIKVIHKTLFPVKGSAVLKTLSYFGLMFYYFLWSVRLDLYTVLKTEKVAVVLAISVSIFTFLIPTGLSLLLKTYVAMEKEVADSLPYIGISQTYTIFISIAVLLTDLKVLNTDIGRLTISVAILTDMTGMVLSMFTFAVIQYTDGDILILVFAALSSFVFLLLIVFMMRPMILWMVKNPGKGSTNEICTVGIFVFVILSGLVSELIGQHFSMGPIILGLSLPEGPPIGTSLMKKLEIMCMDFLYPISLAVNGLVVDIFNININSLWIICLIIVVGFFVKIGAVMLPGYYLNISMKKCWIIGLLLNGRGICELVLFNLWLESQIINEDEFSVMVISVIVINVILVTVVKFMYDPSKPYNNVSRCTIQHSTRDSELRIMVCIDDKETLPTILNLLEASYATRESTIEVTALVLVELQGRARPVLVSNQSHESTHQVLYGSNHMDNALRQYAQQNEEHVSMKSYTSISLFETMHDDICRISLEREANILIMPFHKRWEIDGTVEVAHRSIRTINIKVLQKAPCSVGILVDRGILGATPSLLGGREPYYVVVFFIGGADDVETLAYGARMARQEYVWVTVVRFLLFGEENSKDRKRDSDLIDEYRYHNAGNNRFEILDEVVKDGIDMSICIRRLVDYFDLVMVGRRHSQYAILQGQDNWSECEELGVIGDMLASPNFVTKASVLVIQQQRMRKRVIKPSVNLNRMSKDQLMHSVPTNDSLSPSCTILVDKNDKM 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00016 776 Pfam Sodium/hydrogen exchanger family 33 391 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium764g00016 776 Gene3D - 10 402 IPR038770 -
Vium764g00016 776 PANTHER CATION/H + ANTIPORTER 13 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00016 Vium-Chr764 101791 104464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00016 27 730 Antiporter Super Family AT2G13620 33.243 1.38e-130 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00016 K26731 - gmx:100779700 983.4