Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00010 ATGTCTCCGACCGTGGGAGTCAGCGTCCCACTATTGGGCGAGTCCAACGGAGCAGTGCAGCCGGCCTCCGTCCCCGGTGCGGTGTTCAACGTGGCGACGAGCATAGTCGGCGCCGGGATCATGTCAATTCCGGCGATCATAAAGGTTCTTGGTGTGGTTCCCGCTATCGCTATGATTATTGTCGTGGCCGTGCTCGCGGAACTCTCTGTCGAGTTCCTCATGCGCTTCACGCACTCCGGCGAAACGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGGTCGCCGGGAGCGTTGGTCGCGCAAGCTTGCGTCATCATCACCAACATCGGGGGCTTAATTCTTTACCTGATCATCATCGGGGATGTGCTGTCTGGAAAGCAAGATGGAGGTGAAGTGCATTTGGGTATTCTGCAACAGTGGTTTGGTATTCATTGGTGGAATTCCAGGGAATTTGCTCTTCTCTTCACTTTGGTCTTCGTCATGTTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTGGCTATTTTTGCACTGGTGCAAGGAAAAACGCAGACTCCTAGATTGTTTCCTGGGTTGGACAACCAAACCTCATTCTTTGATCTATTTACTGCAGTTCCCGTTGTTGTCACAGCTTTCACATTTCATTTTAACGTGCATCCAATTGGGTTTGAGTTTGCCAAGCCATCTCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCCGTGATCTACATTACAGTAGGCCTATTTGGGTACCTATTATTTGGGGATTCAACACAATCAGACATTCTCATCAATTTTGACCAGAGTAATGATTCTGTGGTTGGTTCCTTGTTCAATACTTTGATCCGTGTAAGCTATGCGCTCCACATCATGCTGGTGTTTCCTCTCTTGAACTTCTCATTGAGATCCAACATAGATGAAGTTCTCTTCCCCAATAAGCCTATGCTAGCCACAGACAACAAAAGATTCATGATCCTCACTGTGGTGCTGCTTGTATTCTCCTACCTCGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTTGGATCAACATCGGCAGTGTGCCTTGCCTTCATTTTCCCTGGCTCTATTGTTTTAAGGGATGCATGTGGTATAGCAACGAAAAGGGATAAAATTATTGCACTGATAATGATTACACTGGCCGTGGTGACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1311 0.4676 MSPTVGVSVPLLGESNGAVQPASVPGAVFNVATSIVGAGIMSIPAIIKVLGVVPAIAMIIVVAVLAELSVEFLMRFTHSGETTTYAGVMREAFGSPGALVAQACVIITNIGGLILYLIIIGDVLSGKQDGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMFPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAIFALVQGKTQTPRLFPGLDNQTSFFDLFTAVPVVVTAFTFHFNVHPIGFEFAKPSQMTTAVRLALLLCAVIYITVGLFGYLLFGDSTQSDILINFDQSNDSVVGSLFNTLIRVSYALHIMLVFPLLNFSLRSNIDEVLFPNKPMLATDNKRFMILTVVLLVFSYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGSIVLRDACGIATKRDKIIALIMITLAVVTSVLAISTNIYNAFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00010 436 PANTHER AMINO ACID TRANSPORTER 18 419 - -
Vium764g00010 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00010 Vium-Chr764 50131 52613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00010 1 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.469 1.05e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00010 - - gmx:100815694 734.561