Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00009 ATGGTTTCTAAAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTCTTACTAACTCTCATGCACTAAACAAAACCTCGATCATAATAGATGCGTCAAAGTATATCCAGGAATTAAAGCAAAAGGTGGAAGAACTGAATCAAGACTTAGCCAATGCACAAACTTCAACTGACCAAAATACTTTGCCTATGGTTACAGTAGAAACCACGGAGAAGGGCTTTGTTATTAATGTTTTTTCAGCAAAGAGTTGTCCTGGTCTGTTTGTTTCCATATTGGAGTCATTTGAAGAGATGAGTCTGAATGTGCTTGAAGCTAGGGCTACTTGTACAGACACTTTTCGATTTCATGCTGTTGGAGGAAAAAACGAAGAAGAAGGTAAGAATATTGATGCACGAGCTGTGAAACAGGCTATGGGACAAGCAATAAAGAATTGGAGCCAAAATGCTGACCAAAAGTAA 471 0.3928 MVSKEQKRAALHEKLQLLRSLTNSHALNKTSIIIDASKYIQELKQKVEELNQDLANAQTSTDQNTLPMVTVETTEKGFVINVFSAKSCPGLFVSILESFEEMSLNVLEARATCTDTFRFHAVGGKNEEEGKNIDARAVKQAMGQAIKNWSQNADQK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00009 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 65 IPR036638 GO:0046983
Vium764g00009 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 151 - -
Vium764g00009 156 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00009 Vium-Chr764 42941 44497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium764g00009 1 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 26.846 7.61e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00009 - - gmx:100814138 265.774