Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00008 ATGGAAGAAGAGAATATCTTCTTCATCTTTCTGCTGCGATTTAAGAAGGCAGAGGACATGGATTGTTGTGTGTGTACAACTATGCCACTCATACTAAGGCCTCCGAGGAATACAATATGTGGAGCATGTTACGAAGGAGTGAGGAGCATAATCAACATGATGAGCAATTTCGAAACTGAGAAAGTAAAACCAGTAGTGGCCAATCCAAATCCAAACCCTTCTCCAGTTTCACGAAGAAATTCGAGTAAGACACTCGATGATTGTATAAGATGGTGTTCAGAGCATTTAGAACAGTTTAATCAACAGAAGGAAGACTTGGTTTTTCTGAGAGGCTTTGTTGCAGCCTTCAAAGAACAGATTCACACAGATATATTGGTCATTCCAGGCAGACACGGTCCACCTATACCAGCACATAAGTCCGTTTTGGCTGCAAGATCAGAGATATTTAAGAACATGCTAGAGTGCGATGAATGCAAAGAAGCACCGAGTAAGAGCATAACTATACCCGATGTGAAGCACGAAGAATTAGAGTGTCTTCTTGAGTTTCTGTACAATGGAAGCTTGGGTGAGGAAAAATTGGAGAAACATGTGTACGCGCTGTCACAAGCAGCGGATAAGTACGTGATCCCACATTTGCTGAAACACTGCGAACGGTACCTGCTGAGTTCGCTAAGCACTTGCAATGCCCTTGAGACACTGGAGATTGCGGACATTTGTTCCAACCAGAAGTTGAAGGAGACAACCTTGGATTTCTTGGTTAAGAACATTGACCGTGTTGTGTCATCACCTAAATTTGAAGCTTTTGTTCACAGGAGCCCACACCTCACCGTGCAACTAGTTACAATGGCCTTTGCCAATGCTGCTAAATAA 870 0.4299 MEEENIFFIFLLRFKKAEDMDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNFETEKVKPVVANPNPNPSPVSRRNSSKTLDDCIRWCSEHLEQFNQQKEDLVFLRGFVAAFKEQIHTDILVIPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSKSITIPDVKHEELECLLEFLYNGSLGEEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTCNALETLEIADICSNQKLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTMAFANAAK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00008 289 ProSiteProfiles BTB domain profile. 122 192 IPR000210 GO:0005515
Vium764g00008 289 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 39 287 IPR044784 -
Vium764g00008 289 Gene3D Potassium Channel Kv1.1; Chain A 90 224 IPR011333 -
Vium764g00008 289 SUPERFAMILY POZ domain 108 222 IPR011333 -
Vium764g00008 289 SMART BTB_4 122 224 IPR000210 GO:0005515
Vium764g00008 289 Pfam BTB/POZ domain 117 223 IPR000210 GO:0005515
Vium764g00008 289 Gene3D - 225 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00008 Vium-Chr764 37094 38466 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vium764g00008 BTB 1.3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00008 K10523 - gmx:100777561 459.144