Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium764g00007 ATGGAAGAAGAGAATATCTTCTTCATCTTTCTGCTGCGATTTAAGAAGGCAGAGGACATGGATTGTTGTGTGTGTACAACTATGCCACTCATACTAAGGCCTCCGAGGAATACAATATGTGGAGCATGTTACGAAGGAGTGAGGAGCATAATCAACATGATGAGCAATTTCGAAACTGAGAAAGTAAAACCAGTAGTGGCCAATCCAAATCCAAACCCTTCTCCAGTTTCACGAAGAAATTCGAATTATTCTTTCTCTCTGCAGACACTCGATGATTGTATAAGATGGTGTTCAGAGCATTTAGAACAGTTTAATCAACAGAAGGAAGACTTGGTTTTTCTGAGAGGCTTTGTTGCAGCCTTCAAAGAACAGATTCACACAGATATATTGGTCATTCCAGGCAGACACGGTCCACCTATACCAGCACATAAGTCCGTTTTGGCTGCAAGATCAGAGATATTTAAGAACATGCTAGAGTGCGATGAATGCAAAGAAGCACCGAGTAAGAGCATAACTATACCCGATGTGAAGCACGAAGAATTAGAGTGTCTTCTTGAGTTTCTGTACAATGGAAGCTTGGGTGAGGAAAAATTGGAGAAACATGTGTACGCGCTGTCACAAGCAGCGGATAAGTACGTGATCCCACATTTGCTGAAACACTGCGAACGGTACCTGCTGAGTTCGCTAAGCACTTGCAATGCCCTTGAGACACTGGAGATTGCGGACATTTGTTCCAACCAGAAGTTGAAGGAGACAACCTTGGATTTCTTGGTTAAGAACATTGACCGTGTTGTGTCATCACCTAAATTTGAAGCTTTTGTTCACAGGAGCCCACACCTCACCGTGCAACTAGTTACAATGGCCTTTGCCAATGCTGCTAAATAA 885 0.4282 MEEENIFFIFLLRFKKAEDMDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNFETEKVKPVVANPNPNPSPVSRRNSNYSFSLQTLDDCIRWCSEHLEQFNQQKEDLVFLRGFVAAFKEQIHTDILVIPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSKSITIPDVKHEELECLLEFLYNGSLGEEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTCNALETLEIADICSNQKLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTMAFANAAK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium764g00007 294 Pfam BTB/POZ domain 122 228 IPR000210 GO:0005515
Vium764g00007 294 Gene3D - 230 294 - -
Vium764g00007 294 ProSiteProfiles BTB domain profile. 127 197 IPR000210 GO:0005515
Vium764g00007 294 SUPERFAMILY POZ domain 113 227 IPR011333 -
Vium764g00007 294 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 39 292 IPR044784 -
Vium764g00007 294 Gene3D Potassium Channel Kv1.1; Chain A 95 229 IPR011333 -
Vium764g00007 294 SMART BTB_4 127 229 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium764g00007 Vium-Chr764 37093 38466 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vium764g00007 BTB 1.3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium764g00007 K10523 - gmx:100777561 450.284