Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7567g00001 AATGCTGATCTATCAGCTTCGGACACAAGAACAATGTTTGAAGAGCAGAAGAGAATTATACAGGGGCTACATGAGCGTTTGGCAGATAAAGAATTTCAAGTAGTAGAAGGAGAGAAGCTACGAAAAAAACTGCATAACACTATTTTGGAACTAAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTCCTACCAGATGACAGTGCGGACACAGTTGTTTCATTCCCTACTTCAACAGAAGCTCTTGGTCGGGGCATTGAATTAGTACAAAGCGGACAAAAGTACAATTTCACATTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTAGAGATATCACAACTGGTACAAAGTGCACTTGATGGCTACAAGGTATGCATATTTGCATATGGACAGACGGGTTCAGGTAAAACCTATACTATGATGGGTAGGCCTGATGAGCCAGATCTGAAAGGGTTGATACCCCGTTCTTTAGAACAGATATTTCAGACTAGCCAATCTCTAAAAGATCAAGGGTGGAAGTACACAATGCAGGCATCAATTCTGGAAATATATAATGACACCATCAGGGATTTGTTATTAACCAATCGGTCAAGTGATCATGCACGGACGGAAAATAATGCTTCCAGCAAGCAGTACACTATAAAACATGATGCAAACGGAAACACACATGTTTCGGACCTCACAATAAAGGATGTTTGTAGCGCAGATGAGATTTCCTCCCTCCTACGACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAACAGTCATCCAGAAGCCATTTTGTCTTTACACTGCGTATAAGTGGGAAAAATGAGAACACTGAACAACAAGTCCACGGTGTCTTAAACCTGATCGATCTTGCTGGTAGTGAAAGACTCTCAAAGAGTGGGGCAACTGGAGACCGGTTGAAGGAAACTCAGGCTATCAACAGAAGTCTATCTTGTTTGAGCGATGTCATATTTGCTTTGGGAGGAAAGAAAGAAGACCATGTTCCTTTTAGGAATTCAAAGCTGACGTACCTTCTCCAGCCATGTCTCGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATCTCTCCTGATCAATCTTCCACTGGTGAGTCACTTTGCTCCCTACGCTTTGCAGCCAGAGTCAATGCCTGTGAAATTGGGATTCCACGGCGTCAGACTCATACATCATCATCACGCTCCTCAGAATCCCGTTTGAGCTACGGTTAA 1248 0.4343 NADLSASDTRTMFEEQKRIIQGLHERLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSADTVVSFPTSTEALGRGIELVQSGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDEPDLKGLIPRSLEQIFQTSQSLKDQGWKYTMQASILEIYNDTIRDLLLTNRSSDHARTENNASSKQYTIKHDANGNTHVSDLTIKDVCSADEISSLLRQAAQSRSVGRTQMNEQSSRSHFVFTLRISGKNENTEQQVHGVLNLIDLAGSERLSKSGATGDRLKETQAINRSLSCLSDVIFALGGKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFAARVNACEIGIPRRQTHTSSSRSSESRLSYG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7567g00001 415 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 PRINTS Kinesin heavy chain signature 291 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 PRINTS Kinesin heavy chain signature 127 148 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 389 IPR027417 -
Vium7567g00001 415 FunFam Kinesin-like protein 1 393 - -
Vium7567g00001 415 CDD KISc_C_terminal 52 393 - -
Vium7567g00001 415 Gene3D Kinesin motor domain 2 393 IPR036961 -
Vium7567g00001 415 Pfam Kinesin motor domain 60 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 403 IPR027640 GO:0003777|GO:0007018
Vium7567g00001 415 SMART kinesin_4 52 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 ProSiteProfiles Kinesin motor domain profile. 54 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7567g00001 415 ProSitePatterns Kinesin motor domain signature. 290 301 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7567g00001 Vium-Chr7567 526 3648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7567g00001 14 388 Calmodulin-binding Proteins AT5G65930 39.733 1.51e-80 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7567g00001 K10405 - gmx:100818473 667.922