Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7537g00016 ATGGAAGATACATTTGTTCCGTTTCGTGGAATTAAAAATGATCTTCAAGGCAGATTGATGTGTTACAAGCAAGACTGGATTGGTGGTCTTAGAGCAGGCTTCAGGATATTGGCCCCTACCACGTATATATTTTTTGCATCAGCAATTCCTGTTATTTCGTTTGGAGAACAATTGGAAAGAGACACAGATGGATTACTTACCGCAGTTCAAACTTTAGCATCTACTGCATTGTGTGGAATTGTACAGTCTATTATAGGAGGCCAACCTTTACTGATTCTTGGAGTAGCAGAACCAACTGTAATTATGTATACATTCATGTTCAACTTTGCGAAAGGAAGGCCAGAATTGGGTTCAAAACTCTTTCTAGCATGGACTGGATGGGTATGCGTGTGGACTGCCATTTTGTTGTTCCTATTGGCTATCTTGGGAGCTTGCTCCATCATCAACAGGTTCACTCGATTAGCAGGGGAACTGTTTGGTCTTCTTATTGCAATGCTTTTTATGCAAGAGGCTATTAAAGGACTCATCCATGAGTTTCACATACCTGAGAGAGCAAACCCATCATCACCTGAGTTTCAATCTTCATGGAGATTTGGAAATGGCATGTTTTCCTTGGTTCTGTCCTTTGGCCTCTTGCATACAGCATTGAAAAGCCGAAAGGCAAGGTCTTGGCGATATGGATCAGGATGTTTACGAGGCTTCATAGCAGATTATGGTGTCCCATTGATGGTTCTAGTATGGACTGCCATTTCTTATATTCCAGCTGGAAGTATTCCAAAAGGAGTTCCTAGGCGTCTTTTCAGTCCAAATCCATGGTCCTCTGGTGCATTTGAAAACTGGACTGTCATAAAGGACATGCTGAAAGTACCAGTTCTCTATATTATTGGAGCATTTATTCCAGCAACAATGATTGCTGTTCTATATTATTTCGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAATTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTATTGGGCTTCATGGTTATAATATGTGGTCTAATTGGAATTCCTCCGTCCAACGGTGTTATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACCAGTTACTTAGGAACCGGCTTGTTGCTGCAGCACGAAGTTCTATGAGAAAACAAGAAAGTTTGGGACAAGTATATGGGAGTATGCAAGATGCGTACTGGCAGATGCAAACCCCTCTAGCTCACGAAGAATCTTCCTCAAAGGGACTTAAAGAGTTGAAAGAGTCGACAATTCAATTGGCATCAAGCATGGGGAGTATAAATGCTCCAGTTGACGAGTCAATATTTGATGTCAAGAAGGAAATTGATGATTTATTGCCTGTTGAGGTCAAAGAGCAACGAATGAGCAACCTGCTCCAGTCAGTGATGGTAGTAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCAACTTCTGTGCTATGGGGTTATTTTGCTTTCATGGCCATTGAAAACTTACCTGGCAACCAGTTCTGGGAACGGATTTTATTCATTTTAACTGCTCCAAGCAGAAGATACAAAGTTCTGGAGGAGTGCCATGCAACTTATTTGGAAACCGTTCCATTCAAGACAATTGCAGTGTTTACAGTCTTCCAGACTGCTTACTTGCTTGTTTGTTTTGGTATCACTTGGATTCCAACAGCTGGGGTTCTATTCCCATTGATGATAATGTTTCTGGTTCCCGTTAGGCAATACATTCTGCCCAAGGTTTTCAAAGGAGCACACCTTCAAGATTTAGATGCTGCAGAATATGAAGAAGTATCTGCTTTACCATTCAGCCTAGCTACTGAAGGGGACTTGAGCAAGACAGCTTCCTTTGCAGATGATGGAGAAATTGTAGATGGAATAATCACCAAAAGCAGGGGTGAGATAAGACATGTTTGCAGTCCTAAGTTCATGAGCTCCACTCCAATCACATCCCAAGAGTTAACCAGTGTTCAAAGTCCAAGGTTACCAGATAAGGTATAA 2028 0.4142 MEDTFVPFRGIKNDLQGRLMCYKQDWIGGLRAGFRILAPTTYIFFASAIPVISFGEQLERDTDGLLTAVQTLASTALCGIVQSIIGGQPLLILGVAEPTVIMYTFMFNFAKGRPELGSKLFLAWTGWVCVWTAILLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQEAIKGLIHEFHIPERANPSSPEFQSSWRFGNGMFSLVLSFGLLHTALKSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAISYIPAGSIPKGVPRRLFSPNPWSSGAFENWTVIKDMLKVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVIICGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVAAARSSMRKQESLGQVYGSMQDAYWQMQTPLAHEESSSKGLKELKESTIQLASSMGSINAPVDESIFDVKKEIDDLLPVEVKEQRMSNLLQSVMVVGCVAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILFILTAPSRRYKVLEECHATYLETVPFKTIAVFTVFQTAYLLVCFGITWIPTAGVLFPLMIMFLVPVRQYILPKVFKGAHLQDLDAAEYEEVSALPFSLATEGDLSKTASFADDGEIVDGIITKSRGEIRHVCSPKFMSSTPITSQELTSVQSPRLPDKV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7537g00016 675 PANTHER ANION EXCHANGE PROTEIN 2 608 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vium7537g00016 675 Gene3D Helical hairpin bin 18 60 - -
Vium7537g00016 675 FunFam probable boron transporter 2 18 60 - -
Vium7537g00016 675 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vium7537g00016 675 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Vium7537g00016 675 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7537g00016 Vium-Chr7537 82461 88006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7537g00016 1 673 Antiporters AT3G62270 76.775 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7537g00016 K24194 - gmx:100795777 1224.54