Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7537g00010 ATGAGCATGGAAGCTGATGCTACTACCACTTCACAGTTACCACTAGCCGACACAGACATCAACTGGGACAGGTTGGACAAAACCAAGTTCCACGTCATCGGTGCCGTTCTCTTCACGGCTCAATCAGGCCTGCTTCATCCAACGGCGGTGGTGAAGACACGAATGCAAGTGGCGGGGTCGGAGTCCTGGCACCTGCGAGGAGGAACGTCGGTGCTGGCCCAAATTCTGAGGAGCGATGGCGTTTCGGGAATCTTCAGAGGCTTCGGCACTTCCGCCATTGGTTCAATCCCCGGTAGGGTTCTGGCGCTCACCTCTCTCGAGGTCTCCAAAGACATTATCTTGAAACACACGCAAGCCGCTCGCATTCCAGAAGCTTCTCGTGTTGGCCTCGCTAACGCATTCGCTGGCATGATCTCTAACTTGGTTTCCTGCGTCTACTTCGTGCCCTTGGATGTGATTTGTCAGAGGTTGATGGTGCAGGGTCTTCCTGGGACAGCGTTCTGTAGAGGGCCGTTTGATGTTGTTCGGAAAGTTGTGGAGAATGAGGGGTTTCGTGGTCTGTACAGGGGTTTTGGATTAACGGCGATCACGCAGTCCCCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCCGCACAACACCTAATTTGGAGAAGTTTGGGCTACAAAGATGATACGGGTAAAAAACCTTCACATGTGGAAATGGTTACAGTTCAGGCTAGTGCTGGGATGGTGGCTGGTGCTTGTTCATCTGTTATCACTACTCCCATAGATACTGTGAAAACACGTCTTCAGGTGATGGACAACTATGGCTCTGAAAGACCATCAGTACTGAAGACAGCAAAGATTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGGGGCTTTGGACCAAGATTTTTGAATATGTCACTTTATGGAACAACCATGATTGTTACTTACGAACTGATAAAGAGATTATCGGTTCAATCAAGTTTGAGGTCTTTTACGTAG 996 0.496 MSMEADATTTSQLPLADTDINWDRLDKTKFHVIGAVLFTAQSGLLHPTAVVKTRMQVAGSESWHLRGGTSVLAQILRSDGVSGIFRGFGTSAIGSIPGRVLALTSLEVSKDIILKHTQAARIPEASRVGLANAFAGMISNLVSCVYFVPLDVICQRLMVQGLPGTAFCRGPFDVVRKVVENEGFRGLYRGFGLTAITQSPASALWWGSYAAAQHLIWRSLGYKDDTGKKPSHVEMVTVQASAGMVAGACSSVITTPIDTVKTRLQVMDNYGSERPSVLKTAKILLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQSSLRSFT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7537g00010 331 Pfam Mitochondrial carrier protein 35 116 IPR018108 -
Vium7537g00010 331 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Vium7537g00010 331 Pfam Mitochondrial carrier protein 238 323 IPR018108 -
Vium7537g00010 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Vium7537g00010 331 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 325 - -
Vium7537g00010 331 Gene3D Mitochondrial carrier domain 123 328 IPR023395 -
Vium7537g00010 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 112 IPR018108 -
Vium7537g00010 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 321 IPR018108 -
Vium7537g00010 331 SUPERFAMILY Mitochondrial carrier 23 317 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7537g00010 Vium-Chr7537 47483 50387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7537g00010 17 321 Chloroplast and Mitochondria Gene Families AT5G15640 50.163 1.38e-101 300