Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7537g00009 ATGAGCATGGAAGCTGATGCTACTACCACTTCACAGTTACCACTAGCCGACACAGACATCAACTGGGACAGGTTGGACAAAACCAAGTTCCACGTCATCGGTGCCGTTCTCTTCACGGCTCAATCAGGCCTGCTTCATCCAACGGCGGTGGTGAAGACACGAATGCAAGTGGCGGGGTCGGAGTCCTGGCACCTGCGAGGAGGAACGTCGGTGCTGGCCCAAATTCTGAGGAGCGATGGCGTTTCGGGAATCTTCAGAGGCTTCGGCACTTCCGCCATTGGTTCAATCCCCGGTAGGGTTCTGGCGCTCACCTCTCTCGAGGTCTCCAAAGACATTATCTTGAAACACACGCAAGCCGCTCGCATTCCAGAAGCTTCTCGTGTTGGCCTCGCTAACGCATTCGCTGGCATGATCTCTAACTTGGTTTCCTGCGTCTACTTCGTGCCCTTGGATGTGATTTGTCAGAGGTTGATGGTGCAGGGTCTTCCTGGGACAGCGTTCTGTAGAGGGCCGTTTGATGTTGTTCGGAAAGTTGTGGAGAATGAGGGGTTTCGTGGTCTGTACAGGGGTTTTGGATTAACGGCGATCACGCAGTCCCCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCCGCACAACACCTAATTTGGAGAAGTTTGGGCTACAAAGATGATACGGGTAAAAAACCTTCACATGTGGAAATGGTTACAGTTCAGGCTAGTGCTGGGATGGTGGCTGGTGCTTGTTCATCTGTTATCACTACTCCCATAGATACTGTGAAAACACGTCTTCAGGTGATGGACAACTATGGCTCTGAAAGACCATCAGTACTGAAGACAGCAAAGATTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGGGGCTTTGGACCAAGATTTTTGAATATGTCACTTTATGGAACAACCATGATTGTTACTTACGAACTGATAAGTATGTCACCTCTTGCTTATTTATTTTGGCACCATATGAACCTCCTCTTTTAG 1008 0.495 MSMEADATTTSQLPLADTDINWDRLDKTKFHVIGAVLFTAQSGLLHPTAVVKTRMQVAGSESWHLRGGTSVLAQILRSDGVSGIFRGFGTSAIGSIPGRVLALTSLEVSKDIILKHTQAARIPEASRVGLANAFAGMISNLVSCVYFVPLDVICQRLMVQGLPGTAFCRGPFDVVRKVVENEGFRGLYRGFGLTAITQSPASALWWGSYAAAQHLIWRSLGYKDDTGKKPSHVEMVTVQASAGMVAGACSSVITTPIDTVKTRLQVMDNYGSERPSVLKTAKILLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELISMSPLAYLFWHHMNLLF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7537g00009 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Vium7537g00009 335 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 319 - -
Vium7537g00009 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 112 IPR018108 -
Vium7537g00009 335 Pfam Mitochondrial carrier protein 35 116 IPR018108 -
Vium7537g00009 335 Pfam Mitochondrial carrier protein 238 318 IPR018108 -
Vium7537g00009 335 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Vium7537g00009 335 SUPERFAMILY Mitochondrial carrier 23 317 IPR023395 -
Vium7537g00009 335 Gene3D Mitochondrial carrier domain 34 322 IPR023395 -
Vium7537g00009 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 321 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7537g00009 Vium-Chr7537 47483 50388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7537g00009 17 318 Chloroplast and Mitochondria Gene Families AT5G15640 49.671 5.37e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7537g00009 K15121 - gmx:112997745 546.584