Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7537g00008 ATGAGCATGGAAGCTGATGCTACTACCACTTCACAGTTACCACTAGCCGACACAGACATCAACTGGGACAGGTTGGACAAAACCAAGTTCCACGTCATCGGTGCCGTTCTCTTCACGGCTCAATCAGGCCTGCTTCATCCAACGGCGGTGGTGAAGACACGAATGCAAGTGGCGGGGTCGGAGTCCTGGCACCTGCGAGGAGGAACGTCGGTGCTGGCCCAAATTCTGAGGAGCGATGGCGTTTCGGGAATCTTCAGAGGCTTCGGCACTTCCGCCATTGGTTCAATCCCCGGTAGGGTTCTGGCGCTCACCTCTCTCGAGGTCTCCAAAGACATTATCTTGAAACACACGCAAGCCGCTCGCATTCCAGAAGCTTCTCGTGTTGGCCTCGCTAACGCATTCGCTGGCATGATCTCTAACTTGGTTTCCTGCGTCTACTTCGTGCCCTTGGATGTGATTTGTCAGAGGTTGATGGTGCAGGGTCTTCCTGGGACAGCGTTCTGTAGAGGGCCGTTTGATGTTGTTCGGAAAGTTGTGGAGAATGAGGGGTTTCGTGGTCTGTACAGGGGTTTTGGATTAACGGCGATCACGCAGTCCCCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCCGCACAACACCTAATTTGGAGTTTGGGCTACAAAGATGATACGGGTAAAAAACCTTCACATGTGGAAATGGTTACAGTTCAGGCTAGTGCTGGGATGGTGGCTGGTGCTTGTTCATCTGTTATCACTACTCCCATAGATACTGTGAAAACACGTCTTCAGGTGATGGACAACTATGGCTCTGAAAGACCATCAGTACTGAAGACAGCAAAGATTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACAGGGGCTTTGGACCAAGATTTTTGAATATGTCACTTTATGGAACAACCATGATTGTTACTTACGAACTGATAAGTATGTCACCTCTTGCTTATTTATTTTGGCACCATATGAACCTCCTCTTTTAG 1005 0.4955 MSMEADATTTSQLPLADTDINWDRLDKTKFHVIGAVLFTAQSGLLHPTAVVKTRMQVAGSESWHLRGGTSVLAQILRSDGVSGIFRGFGTSAIGSIPGRVLALTSLEVSKDIILKHTQAARIPEASRVGLANAFAGMISNLVSCVYFVPLDVICQRLMVQGLPGTAFCRGPFDVVRKVVENEGFRGLYRGFGLTAITQSPASALWWGSYAAAQHLIWSLGYKDDTGKKPSHVEMVTVQASAGMVAGACSSVITTPIDTVKTRLQVMDNYGSERPSVLKTAKILLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELISMSPLAYLFWHHMNLLF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7537g00008 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Vium7537g00008 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 215 IPR018108 -
Vium7537g00008 334 Pfam Mitochondrial carrier protein 237 317 IPR018108 -
Vium7537g00008 334 Pfam Mitochondrial carrier protein 35 116 IPR018108 -
Vium7537g00008 334 Pfam Mitochondrial carrier protein 131 216 IPR018108 -
Vium7537g00008 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 112 IPR018108 -
Vium7537g00008 334 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 318 - -
Vium7537g00008 334 Gene3D Mitochondrial carrier domain 21 126 IPR023395 -
Vium7537g00008 334 Gene3D Mitochondrial carrier domain 127 321 IPR023395 -
Vium7537g00008 334 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7537g00008 Vium-Chr7537 47483 50388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7537g00008 17 317 Chloroplast and Mitochondria Gene Families AT5G15640 49.342 1.33e-96 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7537g00008 K15121 - gmx:112997745 540.036