Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7517g00001 ATGGATATTGACACTCCACGTTTCCTTCAAATGATTTCAACTTTGGTTCTCATTCTAGTTTCTGTTCCATCACTGACTTCAGCGTCTCTCAAAGTAGGTTTCTACACCTCCACATGTTCATCTGCGGAGGAAATAGTGAGAAATGCCGTAAACAAAGGAATTTCTGAAAATCCTGGCATAGCTGCTGGTCTCATTAGGATGCATTTCCACGACTGCTTTGTTAGGGGCTGTGAGGGTTCTGTGTTGCTAGCATCTACCCCGGGTAACCCAATAGCGGAAAGAGACCATCTTGCCAACAACCCAAGCTTACGTGGGTTCGAGGTGATCGAGGAGGCCAAGACACAGTTGGAGGCTGCATGTCCTGGAACGGTGTCGTGTGCAGACATATTGGCTTTCGCAGCACGAGACAGTGCTCTTAAAGTTGGCGGCATAAACTACGACGTTCCATCAGGACGCAGAGACGGTCGTGTCTCTATCGCCGACGAAGTGGCACAGAATCTACCTGCACCAACCTCGAGTGCCGCTGAACTCGTGAGTAGATTTGCACAGAAGGGTTTGAGTGCAGACGAAATGGTGACACTTTCAGGAGCTCATTCGATCGGTGTGTCGCACTGTTCCGCCTTCTCGAAGCGCTTGTACTCTTTCAATGACACGTTCACGCAAGATCCCTCCATGGACTCTTCCTACGCCGAAACGTTGAAGACCAAGTGCCCTGCGCCACCTGCCACCTCAGACCCAACACTCTCTCTTGACCCTTCCACTCCGGTTCGTTTGGACATCAAATACTACGAGGGATTGATCAACCACCGTGGCCTGTTGACGTCGGATCAGACGCTGTTCACCACCCAGTCCACAAGAGACAAGGTCGTGAACAATGCAAACAACGGTGCAAGCTGGTCTGAGAAGTTTGCCAAGGCAAAGGTGCAAATGGGTTCCATAGAAGTGCTCACTGGCTCCAGTGGCGAGATCAGGAAGCATTGCAGCTTTGTTAATTAA 996 0.503 MDIDTPRFLQMISTLVLILVSVPSLTSASLKVGFYTSTCSSAEEIVRNAVNKGISENPGIAAGLIRMHFHDCFVRGCEGSVLLASTPGNPIAERDHLANNPSLRGFEVIEEAKTQLEAACPGTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIADEVAQNLPAPTSSAAELVSRFAQKGLSADEMVTLSGAHSIGVSHCSAFSKRLYSFNDTFTQDPSMDSSYAETLKTKCPAPPATSDPTLSLDPSTPVRLDIKYYEGLINHRGLLTSDQTLFTTQSTRDKVVNNANNGASWSEKFAKAKVQMGSIEVLTGSSGEIRKHCSFVN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7517g00001 331 CDD secretory_peroxidase 30 330 IPR033905 GO:0004601|GO:0042744
Vium7517g00001 331 ProSiteProfiles Plant heme peroxidase family profile. 29 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Vium7517g00001 331 FunFam Peroxidase 33 178 - -
Vium7517g00001 331 PANTHER PEROXIDASE 25-RELATED 19 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vium7517g00001 331 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 Gene3D Peroxidase, domain 2 168 310 - -
Vium7517g00001 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 Pfam Peroxidase 46 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 SUPERFAMILY Heme-dependent peroxidases 30 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium7517g00001 331 Gene3D - 33 331 - -
Vium7517g00001 331 FunFam Peroxidase 168 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7517g00001 Vium-Chr7517 470 1612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7517g00001 17 331 Peroxidase AT1G05260 47.170 2.59e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7517g00001 K00430 - gmx:100815350 555.829