Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7513g00010 ATGGATCGGCCGGCGACCGGAATTGGATTGGACACGCCGATCATGCACGATAGCGACCGTTACGATTTCGTTCGCGATATTGGGTCTGGGAATTTCGGCGTTGCTAGACTTATGAGGGACAAGCAAACGCAAGAGCTTGTTGCCGTCAAGTATATAGAACGCGGAGAAAAGATTGATCAAAATGTTAAAAGAGAAATAATTAATCACAGGTCTCTAAGGCATCCTAACATTATTGGGTTTAAGGAGGTCATTTTAACACCTACCCATCTTGCCATTGTAATGGAATTTGCATCTGGAGGAGAATTATTTGCCCGAATCTGCAATGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGTGTCAGTCACTGTCATGCAATGTGTGTCACCGGGACTTGA 420 0.4476 MDRPATGIGLDTPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTQELVAVKYIERGEKIDQNVKREIINHRSLRHPNIIGFKEVILTPTHLAIVMEFASGGELFARICNAGRFTEDEARFFFQQLISGVSHCHAMCVTGT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7513g00010 139 FunFam Serine/threonine-protein kinase SRK2E 15 96 - -
Vium7513g00010 139 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Vium7513g00010 139 PANTHER SERINE/THREONINE KINASE 20 134 - -
Vium7513g00010 139 Gene3D Transferase(Phosphotransferase) domain 1 97 137 - -
Vium7513g00010 139 SUPERFAMILY Protein kinase-like (PK-like) 19 136 IPR011009 -
Vium7513g00010 139 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Vium7513g00010 139 Pfam Protein kinase domain 21 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium7513g00010 139 ProSiteProfiles Protein kinase domain profile. 21 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium7513g00010 139 SMART serkin_6 21 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7513g00010 Vium-Chr7513 102295 107367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7513g00010 20 136 CBL-interacting serine-threonine protein kinases AT2G26980 38.843 5.24e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vium7513g00010 Pkinase 1.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7513g00010 K14498 - gmx:100783967 253.447