Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7513g00007 ATGGCAGATCTGTTCAGTGGAGCTGCTGTGGGAGCACTGATGGGAGAGGCATTGAAAGGGGCTATTTCAATCATAAAAAAAGGTGTAGCCTTCAAATCCACACTCGATAGCAACATAGAAACCTTAGAGTCTTTGGCTCCTCTGGTGGAGGAGATGAAGATGTACAACATGAGGTTGGATCGGCCCAGCAAGGAGATAGAGAAGTTGGAGAGTCTCATGCGAAATAGTCAAGAGCTGGTTCGGAAGTGCTCGAAATTGGGTCGGTCGAAAATGTGGTCGTTCCCTTATTACCAGAGCAAGCTTCGGAGCAAAGACGGGGCTCTCCAGACGCACTTATCGATGAACATGACGGCGCAGAACACGGCGAACTTGATGAAGGTGATGGACGACATGAGGAAGGTTATGGAGATTCTGCTAAAAGAGGGATTCGGGCGTTATCCTGAGTATCAGTTCATGGGTATCTGTGGGGCTCCTCAAGAACCTGAGTGTTTGGGAATGGTTGTGCCTTTAAGCAAGCTGAGGATTGAGTTGCTCAAGGATGGTGTGTCTGTTCTTGTCTTGACTGGTTTGGGAGGGTCGGGGAAAAGCACACTGGCTAAGAAGATATGTTGGGTCCCTCAAGTCAAAGACAAGTTCGGGAAAAACATCTTCTTTGTCACTGTATCAAAAACTCCCGACTTGAAGACCATTGTGGAGACACTGTTTGAACACTGCGGTTTTAAGGTTCCGAAGTTTCAAACCGATGAAGATGCAGTAAATCGACTGGAAGTTCTGCTGAGGCTTCTTGGGCAACATCCAATATTGTTGGTCTTGGATGATGTTTGGCCTGGCTCAGAAGACCTTGTTGAGAAGTTTAAAATTCAGATACCTGATTACAAGATTTTGGTTACTTCAAGGGTTTCATTTCCAAGATTTGGCACCTCATACCAGTTGGATAAACTTGATGATGTCCATGCAGAATCCCTTTTCCGTCACTTTGCACAGCTGAAAGACAAAAGCTCATACATACCTGAAAAAAATCTTGTCGACGAGATAGTGAAAGGTTGCAAGGGTTCACCATTGGCCCTTAAGGTGATTGCTGGATCGCTCTGTAACAAGTCTTTTGAGGTGTGGCGAGATATGATGGAGCATTTACAAAAGCAATCCATTCTGGAGTCTGATACTGATTTGCGTTTTCGTCTTCAACAAAGTTTAGATATATTGGAGACTAAGTTCTCCGTCAATGGAAAGGAGTTTTTCATGGATCTGGGGCTATTTCCTGAAGATCAAAGAATCCCTGTAGCCGCCCTCATTGATATGTGGGCAGAACTGTATAACCTTAATGAAGATGGTAGCAATGCAATGTCCATTATCCATGATTTAACCACCAGGAATTTGATTAATGTTATAGTTACAAGGAAAGTTGCACAGGATACAGACATGTACTACAATAACCATTTTGTTTTGGTGCATGATCTCCTTAGAGAGCTGGCAATACATCTGAGCAAAGGGGAAAAAACATTTGAACAGAGAGAAAGAGTGATGATTGAGTTAAAGGGAGATAATCGTCCTGAATGGTGGGTAGGACTGAATCCGCTTGGAATCATTGGCCGTTCCTTCTCATACATCCTGGGAATGTTGCATAGACAGAAACAACCAAAGGTTGCTGCTCGCATATTGTCTATTTCAACTGATGAAACGTTTAATTCGGATTGGTGTGACATGCAACCAGACGAAGCTGAGGTTCTGGTTTTAAATCTTCTTTCTAGCCAGTACTCGTTGCCAGAGTTCACAGAGAAGATGCATAAACTGAAAGTTCTGATTGTCACAAATTATGGTTTCCATCGCTCTGAACTAAACATGTTTGAGCGACTTGGTTCTTTAACTAATTTGAAAAGAATCAGATTGGAAAAGGTTTCAATCCCTCCCCTGTGCATATTGAAGAATCTACGAAAATTGTCCATTCATATGTGTAATACACGGCAGGCTTTTGAAAGATATTCTATCTCGGATGCAATGCCAAATCTCGTGGAGATGAGCATTGATTATTGCAAAGATCTGGTTAAATTGCCTGATGGGCTGTGTAACATCACCCCATTGAAAAAGCTTAGTATCACTAACTGTCACGGGCTTTCTGCACTGCCACAAGATCTTGCAAAGCTGGAGAATTTGGAAGTTCTAAGGCTATGTTCCTGCTCTGATTTGGCATATATGCCAGATTCTGTTAAAGAGCTTAACAAACTTAGCTGTCTCGATATCTCAGACTGTTTAAGTCTTACCAAATTACCAGATGACATTGGTGAGTTGAAGCTTCAGAAGCTCTACTTGAAGGGTTGCTCAAAACTGAGAGAACTGCCAGACTCGGTCGATAAGTTTGAAAATTTAGAGCATGAAATACACGTGATCTGTGATGAAGAAATGGCTTCCCTATGGAAAAATTCTACCATTCGCAATTTGAAGATAGAGATACCTACAGTGGAGGTTAACTTAAATTGGCTTCCTAGAGTTCATTCTTGA 2496 0.4243 MADLFSGAAVGALMGEALKGAISIIKKGVAFKSTLDSNIETLESLAPLVEEMKMYNMRLDRPSKEIEKLESLMRNSQELVRKCSKLGRSKMWSFPYYQSKLRSKDGALQTHLSMNMTAQNTANLMKVMDDMRKVMEILLKEGFGRYPEYQFMGICGAPQEPECLGMVVPLSKLRIELLKDGVSVLVLTGLGGSGKSTLAKKICWVPQVKDKFGKNIFFVTVSKTPDLKTIVETLFEHCGFKVPKFQTDEDAVNRLEVLLRLLGQHPILLVLDDVWPGSEDLVEKFKIQIPDYKILVTSRVSFPRFGTSYQLDKLDDVHAESLFRHFAQLKDKSSYIPEKNLVDEIVKGCKGSPLALKVIAGSLCNKSFEVWRDMMEHLQKQSILESDTDLRFRLQQSLDILETKFSVNGKEFFMDLGLFPEDQRIPVAALIDMWAELYNLNEDGSNAMSIIHDLTTRNLINVIVTRKVAQDTDMYYNNHFVLVHDLLRELAIHLSKGEKTFEQRERVMIELKGDNRPEWWVGLNPLGIIGRSFSYILGMLHRQKQPKVAARILSISTDETFNSDWCDMQPDEAEVLVLNLLSSQYSLPEFTEKMHKLKVLIVTNYGFHRSELNMFERLGSLTNLKRIRLEKVSIPPLCILKNLRKLSIHMCNTRQAFERYSISDAMPNLVEMSIDYCKDLVKLPDGLCNITPLKKLSITNCHGLSALPQDLAKLENLEVLRLCSCSDLAYMPDSVKELNKLSCLDISDCLSLTKLPDDIGELKLQKLYLKGCSKLRELPDSVDKFENLEHEIHVICDEEMASLWKNSTIRNLKIEIPTVEVNLNWLPRVHS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7513g00007 831 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 135 IPR008808 -
Vium7513g00007 831 PRINTS Disease resistance protein signature 736 752 - -
Vium7513g00007 831 PRINTS Disease resistance protein signature 184 199 - -
Vium7513g00007 831 PRINTS Disease resistance protein signature 261 275 - -
Vium7513g00007 831 PRINTS Disease resistance protein signature 349 363 - -
Vium7513g00007 831 SUPERFAMILY L domain-like 574 789 - -
Vium7513g00007 831 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 826 IPR039203 GO:0050832
Vium7513g00007 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 414 IPR027417 -
Vium7513g00007 831 Gene3D - 396 492 IPR036388 -
Vium7513g00007 831 Gene3D Ribonuclease Inhibitor 542 803 IPR032675 -
Vium7513g00007 831 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Vium7513g00007 831 Gene3D - 313 395 IPR042197 -
Vium7513g00007 831 Pfam NB-ARC domain 175 384 IPR002182 GO:0043531
Vium7513g00007 831 Gene3D - 157 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7513g00007 Vium-Chr7513 74245 78461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7513g00007 189 778 WRKY Transcription Factor Family AT5G45050 22.981 6.72e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7513g00007 - - gmx:100792590 1211.44