Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7510g00003 ATGGAAGATAACAACAAGGCTTCATCTCCTGCTTCAACAACCGAAGGAAAACCAATACGATGCAAAGCTGCAGTTGCTAGAAAAGCTCGTGAGCCATTGGTGATTGAAGAGATAACTGTGGCGCCACCATTGCCCAGTGAGGTGCGGATTCGTGTTATCTGTTCCTCTCTCTGCCACAGTGACCTCACTTTTCGGAACCTCCAGGTTCCTCCTGCCATTTTTCCAAGGATTCTGGGTCATGAGGCATCTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTAGAAAAGGTGATGTGGTTATTACAGTTTTCTTACCAGAATGTGGGGAATGCATAGATTGCAAATCAAGCAAGAGCAATCGTTGTTCTATTTTCCCTTTCAAGGTGTCTCCCTGGATGCCTCGAGATGGTACCTCTAGATTCACCGACAAGAATGGAGACATCATAAGCCATTTTCTGTTTATTTCAAGCTTCAGTGAGTACACTGTGGTCGACATTGCCAATATTATCAAGATTGATCCACAAATTCCTCCTGACAGGGCATGCCTTCTTGGATGTGGTGTTTCAACAGGGGTAGGTGCTGCTTGGAGAACCGCTGGTGTGGAAGCAGGGTCTACAGTAGCCATATTTGGGCTGGGGTCTATTGGATTAGCAGTTGCAGAGGGAGCAAGACTTTGTGGAGCAACTAAGATTATAGGTGTTGACGTCAATCCAGAAAAATTTGAAATTGGAAAAAAGTTTGGAGTCACAGATTTTGTCCATGCCGGAGAATGTGGGGACAAACCTGTGAGCCAGGTCTAA 807 0.456 MEDNNKASSPASTTEGKPIRCKAAVARKAREPLVIEEITVAPPLPSEVRIRVICSSLCHSDLTFRNLQVPPAIFPRILGHEASGVVESVGKDVTEVRKGDVVITVFLPECGECIDCKSSKSNRCSIFPFKVSPWMPRDGTSRFTDKNGDIISHFLFISSFSEYTVVDIANIIKIDPQIPPDRACLLGCGVSTGVGAAWRTAGVEAGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPEKFEIGKKFGVTDFVHAGECGDKPVSQV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7510g00003 268 FunFam alcohol dehydrogenase 1-like isoform X1 29 192 - -
Vium7510g00003 268 Gene3D - 16 199 - -
Vium7510g00003 268 Pfam Alcohol dehydrogenase GroES-like domain 46 174 IPR013154 -
Vium7510g00003 268 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Vium7510g00003 268 SUPERFAMILY GroES-like 14 200 IPR011032 -
Vium7510g00003 268 Gene3D - 200 268 - -
Vium7510g00003 268 FunFam S-(hydroxymethyl)glutathione dehydrogenase 193 268 - -
Vium7510g00003 268 PANTHER ALCOHOL DEHYDROGENASE 16 268 - -
Vium7510g00003 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 265 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7510g00003 Vium-Chr7510 40698 49755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7510g00003 47 214 Monolignol Biosynthesis Gene Families AT4G37970 26.627 5.27e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7510g00003 K00121 - gmx:100817521 470.314