Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7488g00002 ATGGTGGTCCTGAGCTGTGCACACTTCGGATTTAGCAAAACTTCAGAAACTGACCTCGCCTATAACCCCGAGTACGTGGCAGGGCTGAGGAAGCTCTGGGAGAACTACATGAAGGACCCTACCATGGCGGCTTACAGCGACGTGCTAACTCCGATGAAGTTCGACAAAATGTATTTCAACGGGCTGATGGCTACTGACACTGCCCTTTTCATTGATCCCAGGACTAAGCCCTTCGTTGACACCTACATCGATGATGAAGGCGACTTCTTTCAGGACTTCGCTCGTGCCATCGAAAAGCTCAAAGCTTGGACGTTAAAACTCGAACAACGTGCTTGA 336 0.5 MVVLSCAHFGFSKTSETDLAYNPEYVAGLRKLWENYMKDPTMAAYSDVLTPMKFDKMYFNGLMATDTALFIDPRTKPFVDTYIDDEGDFFQDFARAIEKLKAWTLKLEQRA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7488g00002 111 Gene3D Peroxidase, domain 2 1 100 - -
Vium7488g00002 111 PANTHER - 11 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium7488g00002 111 ProSiteProfiles Plant heme peroxidase family profile. 9 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium7488g00002 111 SUPERFAMILY Heme-dependent peroxidases 1 104 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7488g00002 Vium-Chr7488 33462 33797 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7488g00002 1 111 Peroxidase AT3G28200 40.000 1.09e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7488g00002 K00430 - vum:124845275 231.876