Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7467g00005 GCGATGTACAACTTGATGGCACATCAATTTGAAGCTTTGCACTTTCTTGCTAATGTCAGGGAGAAATCAGATAAGGATGGTCTAGTGCATATCCAAGAGACAATGCTGTCTGAGTTGGTGGGGGAAAGAAATATCAAGTTAGGAGATGTACATCGAGGAATTCCAATACTACAACACAGACTTTGTGGGAAAAAGGTCTTCCTTGTGCTTGATGATATTAGCAAAAAAGAACAATTGCATGCAACTGCCGGAGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATCATAACAACAAGGGATAAGCATATGTTAGATGTTCATGGAATTCAAAAACAGTACATGGTCGATGAAATTAACTTTGTGGAAGCCCTTGAATTGTTTAAGTGGAATGCTTTCAAAATCAAAGAAGTTGATCCATGTTACAAGGAAGTCACAGAGCGTGCAATGTATTATGCCAATGGCCTTCCATTGGCTTTGGAAACGATAGGCTCGAATTTGTTTGGCAAAACCTTGGATGCATGGGAATCTGCGTTAGAAACTTATGAGAGAATTCCAAATAGAGATGTTCAAGAAGTTCTAAGAGTTAGCTATTATAGGTTGGATGCTTATGAGGATACGTTACAGATAAGCTTGAAGCTAGAGGATTTCCTCAAAAATTTGGTCTGA 669 0.3931 AMYNLMAHQFEALHFLANVREKSDKDGLVHIQETMLSELVGERNIKLGDVHRGIPILQHRLCGKKVFLVLDDISKKEQLHATAGGLDWFGPGSIIIITTRDKHMLDVHGIQKQYMVDEINFVEALELFKWNAFKIKEVDPCYKEVTERAMYYANGLPLALETIGSNLFGKTLDAWESALETYERIPNRDVQEVLRVSYYRLDAYEDTLQISLKLEDFLKNLV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7467g00005 222 Gene3D - 119 202 IPR042197 -
Vium7467g00005 222 PRINTS Disease resistance protein signature 153 167 - -
Vium7467g00005 222 PRINTS Disease resistance protein signature 60 74 - -
Vium7467g00005 222 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 211 IPR044974 GO:0006952
Vium7467g00005 222 Gene3D - 1 115 IPR027417 -
Vium7467g00005 222 Pfam NB-ARC domain 7 211 IPR002182 GO:0043531
Vium7467g00005 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 204 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7467g00005 Vium-Chr7467 55723 56391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7467g00005 1 208 WRKY Transcription Factor Family AT5G45050 30.952 2.51e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7467g00005 - - vum:124845233 448.743