Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7424g00001 ATGGATGATAGTCATGATATAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCAATTGCTTTAAAATTTCAGAAGGAAGATGTTATGTCTTACTTTGAGTATTTAGCATTCTACGATTGGCCCAGCTCAAAGACATTGAAAGAATTTGTAAAGAGTGCTATGTTTGGATACATAGTGTCCTTCATTCTTATAGTAAATCTGGTTGCAGTTATCATTGAGACAACGCTTGATATAGAAAACAATTCTGGTCAAAAGGTGTGGCAAGTGGTTGAGTTCATTTTTGGGTGGATATATGTAGTAGAAATGCTTTTAAAGGTTTATGCATATGGATTTGAGAACTACTGGCGGGATGGTCAAAATCGCTTTGATTTTGTTATCACGGTGATAATTGGTAACTTATTATGGTGCTTGAATACTTTTTGCTCTTTAAACATGTGGTTGAATGCATAG 456 0.3421 MDDSHDIKINKDEFADICNAIALKFQKEDVMSYFEYLAFYDWPSSKTLKEFVKSAMFGYIVSFILIVNLVAVIIETTLDIENNSGQKVWQVVEFIFGWIYVVEMLLKVYAYGFENYWRDGQNRFDFVITVIIGNLLWCLNTFCSLNMWLNA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7424g00001 151 FunFam Two pore calcium channel protein 1 47 147 - -
Vium7424g00001 151 Gene3D - 47 147 IPR027359 -
Vium7424g00001 151 Pfam Ion transport protein 56 131 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vium7424g00001 151 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 133 IPR044581 GO:0005245
Vium7424g00001 151 SUPERFAMILY Voltage-gated potassium channels 55 136 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7424g00001 1 150 Ion Channels AT4G03560 57.325 5.55e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7424g00001 K16900 - vum:124845145 315.079