Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7422g00005 ATGGCTCCAACCCCTTCTTCCAAACAAAATTACCCCACCCAGATGAAGACTCCACAGTCCAAGCACCGTCTCAATTTCCATGGCCCCAAATCAGCACTGCAAATGCACCCTTCTCCCAACCCGAATTGTGCTGCAAACAAGGAACCCCCTCCTGAACACCCAATTGAAGTAGTTGCCAGAATCCGTGACTACCCAGATCGAAAGGATAAGCCTTTATCTGTTCTTCAAACCAGTTCCAACTCGAGTTCTATCCGGGTTCGAGCTGATTTTGGGTACCGGGATTTCACCCTTGATGGGGTTTCTGTGTCTGAGGAAGAGGACCTGGATGTGTTCTATAAAAAGTTTGTGGAGTCGAGGATCAATGGAGTTAAGCTTGGGGACAAGTGCACCATCATGATGTATGGACCAACCGGTTCTGGGAAGAGTCACACAATGTTTGGGTGCTCGAAGCAGGCAGGGATTGTGTATAGGTCTCTTAGGGACATTCTTGGGGATGGGGATAATGCAGATGGAGATTCTAGGGGTGATTCAAGAGAAGAGCATCTCGGGTTGGGGACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTGTTGTCCACCAATGGAGGAGGTGGAGGAGGAGGATTTGGATTTGGCTGGCCTAAGGGGGGTAGTGCTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCCAAGAATGCTACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGGAGGATTGTTAAAAGCACACTTTGTAATGATAGAAGCTCCAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTGGGAGGGCGACTAATGCTCGTAGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAATTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCGCTGAAGAGAGTGGTGGAGTCCATTGCAAATGGTGATTCGCATGTACCATTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTGTGTGCAAGTCCCGATCCTAAGGAGATACACAAGACAATCTCTACACTTGAATATGGGGCAAAAGCAAAATGCATAGTCCGTGGTCCTCATACTCCAGTGAAGGATGAGGAATCCTCTTCTGCTGTCATTTTGGGATCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAAACAAACAAAGAGAGAAAGAGCGTAACGAAGCGCACAAAAAGCTTTTGAAGAAAGAAGAAGAAATTGCTGCATTAAGAAATAAATTGAACCAGGCAGAAGGAAAAGGAACTCCGCCAAGTGAGGAGGAAATTAACTTGAAGGTAAATGAACGCACTCGGCTTCTAAGACAAGAGTTGGAAAAGAAGTTGGCCGAGTGCCAAAGAATGACCAACGAGTTTGTTGAATTGGAGAGGAAGAGAATGGAGGAGAGGATACTGCAGCAGCAAGAGGAAGTTGAAACTCTGAGAAGGAGATTAGAAGAAATTGAGTTGCAGCTATCTTGTTCAAAGCAAGGGGGGAATTGTGAGGAAAACGAGTCAAAAGATATGGAATCAAGTGGGTTTATGAGAAGGCTATTGCGTGTTTACAAAAGTGAGGAGGATCCTGGAATGGTAAAGTCAATGGATTTGGACATGGATGACCAAGAACCCCTTGGCAGTGAAGTGAACATCGTTGGAGGAGTTATGTGTAGGACTGATTACAATGTTAAGCAAGACTTTTCAAACCTACCTTGTCCAAATACTTTGAATGGTGGAAAAGATGATGCTCATATCTTTGCACCCAACTTTGGCCAGAGGGTATGCCTTAGTACAGTATATGAGGAAGAGGGAGAAGGAGATGAAGACAAAGGGGGTGATGAGGAAGTAGAGAAAGAAGTGATAGAAGAAACCAAGGTATGTAGTGTTGAAAAGCCAAGTGCTGAAGGCTCCTTGGCAATATTAAATCTGTCGAACACAAGTCCAAAGAAAGACGATTGTTGTATCAATGTGGATGACAAGGATCTTGGACCCTCTAGACTACTGAGAATTCAAAACATATTCACTCTTTGTGGCAACCAAAGAGAGCTGTCCCAGCACATTGGAACTCCACTTCCCACAAAAAAGAGAACCGGTGAAAATTTCGAGTTTTCTCCTGCCAAGACAACTGACAAGGATTCCGTTTTCAAGATCTCTAACAAGGAGAACTTCGAGCCACAAAATGTTCTGGGAAATTAG 2316 0.4365 MAPTPSSKQNYPTQMKTPQSKHRLNFHGPKSALQMHPSPNPNCAANKEPPPEHPIEVVARIRDYPDRKDKPLSVLQTSSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDNADGDSRGDSREEHLGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGGFGFGWPKGGSASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQIGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKDEESSSAVILGSRIAAMDEFILKLQMENKQREKERNEAHKKLLKKEEEIAALRNKLNQAEGKGTPPSEEEINLKVNERTRLLRQELEKKLAECQRMTNEFVELERKRMEERILQQQEEVETLRRRLEEIELQLSCSKQGGNCEENESKDMESSGFMRRLLRVYKSEEDPGMVKSMDLDMDDQEPLGSEVNIVGGVMCRTDYNVKQDFSNLPCPNTLNGGKDDAHIFAPNFGQRVCLSTVYEEEGEGDEDKGGDEEVEKEVIEETKVCSVEKPSAEGSLAILNLSNTSPKKDDCCINVDDKDLGPSRLLRIQNIFTLCGNQRELSQHIGTPLPTKKRTGENFEFSPAKTTDKDSVFKISNKENFEPQNVLGN 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7422g00005 771 Gene3D Kinesin motor domain 33 394 IPR036961 -
Vium7422g00005 771 MobiDBLite consensus disorder prediction 1 21 - -
Vium7422g00005 771 MobiDBLite consensus disorder prediction 1 52 - -
Vium7422g00005 771 PANTHER KINESIN-RELATED 57 632 IPR027640 GO:0003777|GO:0007018
Vium7422g00005 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 398 IPR027417 -
Vium7422g00005 771 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 36 396 - -
Vium7422g00005 771 Coils Coil 476 539 - -
Vium7422g00005 771 PRINTS Kinesin heavy chain signature 267 284 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7422g00005 771 PRINTS Kinesin heavy chain signature 290 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7422g00005 771 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7422g00005 771 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7422g00005 771 SMART kinesin_4 52 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7422g00005 771 Coils Coil 417 462 - -
Vium7422g00005 771 ProSiteProfiles Kinesin motor domain profile. 54 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium7422g00005 771 Pfam Kinesin motor domain 77 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7422g00005 Vium-Chr7422 13089 16682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7422g00005 109 403 Calmodulin-binding Proteins AT5G65930 27.742 1.69e-25 111