Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium741g00012 ATGAGGTTAACATCACCTGCCATTCTCAACCTTCTCTTTCTATGTGATCTCCTTCTTTGTCTTCCCACATTTTCTTTCTCTCTCCTCGTCGCTGACGCCAAGTCGGACCCGCAGCTTCTCCTCGCCGGGAAAAACGCAACCTCCGTCGTCAATGCCTCGCTTGGGAGATCCGGCGATGATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTCCCCGAGAATGAGCAGAATGAAGGTACCGATCCTGGTGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTCTTGGAAACTGTTGCCAGAGTTATGCCCAAGAAAAATGAAAGCAAAGAAGAAAAGCCATTTCAGTTCCACGATGTTTTCAACTTAGACAATGAGAATAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAATGTCTTTATCATATCCAATCCTAAGTCAAAGTATCCAGTTCTCCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTGTCTGCAACCTGTGGCGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATGACTGGATATCTGCTAGCAGGATCAATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCGGTGGCTATCCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATGTTATCTCGTACTTGTGTACCATGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAGCATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATGTTACTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAGCAACAAGACTTCACTTCTTGTTATTCCACATGCGTAG 1485 0.4303 MRLTSPAILNLLFLCDLLLCLPTFSFSLLVADAKSDPQLLLAGKNATSVVNASLGRSGDDSFANMIDRALEREFPENEQNEGTDPGGFNNSVAEQQAVLETVARVMPKKNESKEEKPFQFHDVFNLDNENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTMLSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDMLLAAVILVIIIKTIVAASVVKGFGYSNKTSLLVIPHA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium741g00012 494 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 43 490 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vium741g00012 494 Gene3D - 162 491 IPR038770 -
Vium741g00012 494 Pfam Sodium/hydrogen exchanger family 169 490 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium741g00012 Vium-Chr741 103249 116289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium741g00012 51 490 Antiporters AT2G19600 85.520 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium741g00012 K26735 - gmx:100788884 864.759