Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium741g00011 ATGCCCAAGAAAAATGAAAGCAAAGAAGAAAAGCCATTTCAGTTCCACGATGTTTTCAACTTAGACAATGAGAATAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAATGTCTTTATCATATCCAATCCTAAGTCAAAGTATCCAGTTCTCCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTGTCTGCAACCTGTGGCGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATGACTGGATATCTGCTAGCAGGATCAATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCGGTGGCTATCCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATGTTATCTCGTACTTGTGTACCATGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAGCATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATGTTACTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAGCAACAAGACTTCACTTCTTGTTGGGATGTCCCTGGCACAAATTGGGGAATTTGCCTTTGTTCTTCTCAGCCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATCTATTGCTCCTGGGAACAACAGCTCTTAGTTTGGTGACTACACCTTTACTCTTCAAGCTAATTCCTGCAGTTGTGCATCTTGGGGCATTGTTACGGTGGTTCCCTCCTGATAGTTCAACTGAGATTGCATTTAAAGGGGACAGCTTTCGTGTAGACAGTGCTAAGCGTATTACTTTGATGGTTCAAGGCTCTCATGATTCATGA 1446 0.4142 MPKKNESKEEKPFQFHDVFNLDNENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTMLSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDMLLAAVILVIIIKTIVAASVVKGFGYSNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSSTEIAFKGDSFRVDSAKRITLMVQGSHDS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium741g00011 481 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 3 472 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vium741g00011 481 Gene3D - 57 440 IPR038770 -
Vium741g00011 481 Pfam Sodium/hydrogen exchanger family 64 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium741g00011 Vium-Chr741 101632 115128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium741g00011 2 481 Antiporters AT2G19600 87.164 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium741g00011 K26735 - gmx:100788884 854.744