Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium741g00010 ATGAGGTTAACATCACCTGCCATTCTCAACCTTCTCTTTCTATGTGATCTCCTTCTTTGTCTTCCCACATTTTCTTTCTCTCTCCTCGTCGCTGACGCCAAGTCGGACCCGCAGCTTCTCCTCGCCGGGAAAAACGCAACCTCCGTCGTCAATGCCTCGCTTGGGAGATCCGGCGATGATAGCTTCGCGAACATGATTGATCGGGCTCTCGAAAGAGAGTTCCCCGAGAATGAGCAGAATGAAGGTACCGATCCTGGTGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTCTTGGAAACTGTTGCCAGAGTTATGCCCAAGAAAAATGAAAGCAAAGAAGAAAAGCCATTTCAGTTCCACGATGTTTTCAACTTAGACAATGAGAATAGAGCAGACGATATGCCAACTTTAATTGATCGGAAGGACAATGTCTTTATCATATCCAATCCTAAGTCAAAGTATCCAGTTCTCCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTGTCTGCAACCTGTGGCGGCATTGCCTTTGCTTCTGCTGGACAACCAGTGATGACTGGATATCTGCTAGCAGGATCAATCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAGCAACGAAGCTTCGAGTTGTTCGAGCGGTGGCTATCCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTAGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACTCTGATACTGCAGGATTGTGCCGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAAGGAGTAGTATCCATGGCTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATGTTATCTCGTACTTGTGTACCATGGTTCCTTAAGCTAATGATAAGTTTATCCTCTCAGACGAATGAACTTTATCAATTGGCATCAGTGGCTTTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAGCATACACTTGAACAAGTTGAGCCAATTCGCAATTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATGTTACTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCATCTGTTGTTAAGGGGTTTGGATACAGCAACAAGACTTCACTTCTTGTTGGGATGTCCCTGGCACAAATTGGGGAATTTGCCTTTGTTCTTCTCAGCCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATCTATTGCTCCTGGGAACAACAGCTCTTAGTTTGGTGACTACACCTTTACTCTTCAAGCTAATTCCTGCAGTTGTGCATCTTGGGGCATTGTTACGGTGGTTCCCTCCTGATAGTTCAACTGAGATTGCATTTAAAGGGGACAGCTTTCGTGTAGACAGTGCTAAGCGTATTACTTTGATGGTTCAAGGCTCTCATGATTCATGA 1761 0.4316 MRLTSPAILNLLFLCDLLLCLPTFSFSLLVADAKSDPQLLLAGKNATSVVNASLGRSGDDSFANMIDRALEREFPENEQNEGTDPGGFNNSVAEQQAVLETVARVMPKKNESKEEKPFQFHDVFNLDNENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFASAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSATKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMAKSLVTLIAFLAILTMLSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDMLLAAVILVIIIKTIVAASVVKGFGYSNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSSTEIAFKGDSFRVDSAKRITLMVQGSHDS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium741g00010 586 Gene3D - 162 545 IPR038770 -
Vium741g00010 586 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 43 577 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vium741g00010 586 Pfam Sodium/hydrogen exchanger family 169 538 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium741g00010 Vium-Chr741 101632 116286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium741g00010 51 586 Antiporters AT2G19600 85.529 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium741g00010 K26735 - gmx:100788884 1010.75