Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium741g00009 ATGGGGAGGAAGTGCTCGCATTGTGGAGTTATAGGGCATAATTCAAGGACCTGCACATCTTTGAGAGGCTCTTCTTTCGTTGGACTTCGTCTCTTTGGCGTGCAATTAGACACTTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCCTCATTTTCTTCTTCAAGAATAACCATCGATGAAAACTCTGACCGAACCTCTTTTGGGTATCTATCAGACGGTCTCATAGGTCGAGTTCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTCGGACTGGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCCAGAAACTTTGTGACCACAAGAACTCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTTAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCTAGTCTCTTTGACGTGCAGGTCGGTAGCAACAACGTAGGAGGTTGTAATTCAGTTTCGGGTTATCATAAAAAAGATGATTCGAAATGTGAAGTTAAGAATAGTGATGCGACTTTGTCGTTGCTAGGGCGCATAACCTACTTTCAACAAGAAAGCAAATCGGATTATAAGAAGCAAGAAAAGCTTGAAAATTGCCCTCATCAAGTTCCTAATCTGGAGCTTACTCTTCGTTCCTGCTTGGGACAATTAGTGTGA 708 0.4336 MGRKCSHCGVIGHNSRTCTSLRGSSFVGLRLFGVQLDTCVTIKKSFSMDSLPSSSSSSFSSSRITIDENSDRTSFGYLSDGLIGRVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDVQVGSNNVGGCNSVSGYHKKDDSKCEVKNSDATLSLLGRITYFQQESKSDYKKQEKLENCPHQVPNLELTLRSCLGQLV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium741g00009 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Vium741g00009 235 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Vium741g00009 235 Gene3D - 93 145 - -
Vium741g00009 235 FunFam transcription factor MYB1R1 93 144 - -
Vium741g00009 235 SMART sant 91 141 IPR001005 -
Vium741g00009 235 ProSiteProfiles SANT domain profile. 95 143 IPR017884 -
Vium741g00009 235 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Vium741g00009 235 CDD SANT 94 139 IPR001005 -
Vium741g00009 235 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Vium741g00009 235 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Vium741g00009 235 PANTHER TRANSCRIPTION FACTOR KUA1 3 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium741g00009 Vium-Chr741 95006 96323 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vium741g00009 Myb_DNA-binding 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium741g00009 - - gmx:778093 345.125